Horse Genomics 1995 - 2007

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Maps

http://www.vgl.ucdavis.edu/equine/caballus/
Horse Map Viewer: Developed by Aaron K. Wong, Stephanie J Bricker and Lee V. Millon at the Veterinary Genetics Laboratory of the University of California, Davis.
Funding was provided by the Veterinary Genetics Laboratory and by the USDA-NRSP8 Horse Species Coordinator's Fund.
Contact: Lee V. Millon lvmillon@ucdavis.edu

2006 Publications


Swinburne JE, Boursnell M, Hill G, Pettitt L, Allen T, Chowdhary B, Hasegawa T, Kurosawa M, Leeb T, Mashima S, Mickelson JR, Raudsepp T, Tozaki T, Binns M. (2006) Single linkage group per chromosome genetic linkage map for the horse, based on two three-generation, full-sibling, crossbred horse reference families. Genomics 87:1-29
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=16314071

2005 Publications


M.C.T. Penedo, L.V. Millon, D. Bernoco, E. Bailey, M. Binns, G. Cholewinski, N. Ellis, J. Flynn, B. Gralak, A. Guthrie, T. Hasegawa, G. Lindgren, L.A. Lyons, K.H. Røed, J.E. Swinburne, T. Tozaki (2005) International equine gene mapping workshop report: a comprehensive linkage map constructed with data from new markers and by merging four mapping resources. Cytogenetic and Genome Research 111:5–15
PDF File

2003 Publications


Chowdhary, B.P.; Raudsepp, T.; Kata, S.R.; Goh, G.; Millon, L.V.; Allan, V.; Piumi, F.; Guérin, G.; Swinbyrne, J.; Binns, M.; Lear, T.L.; Mickelson, J.; Murray, J.; Antczak, D.F.; Womack, J.E.; Skow, L.C. (2003) The First-Generation Whole-Genome Radiation Hybrid Map in the Horse Identifies Conserved Segments in Human and Mouse Genomes. Genome Research 13:742-751
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=12671008&dopt=AbstractPower Point Slides

Guérin, G.; Bailey, E.; Bernoco, D.; Anderson, I.; Antczak, D.F.; Bell, K.; Biros, I.; Bjørnstad, G.; Bowling, A.T.; Brandon, R.; Caetano, A.R.; Cholewinski, G.; Colling, D.; Eggleson, M.; Ellis, N.; Flynn, J.; Gralak, B.; Hasegawa, T.; Ketchum, M.; Lindgren, G.; Lyons, L.A.; Millon, L.V.; Mariat, D.; Murray, J.; Neau, A.; Røed, K.; Sandberg, K.; Skow, L.C.; Tammen, I.; Tozaki, T.; VanDyk, E.; Weiss, B.; Young, A.; Ziegle, J. (2003) The second generation of the International Equine Gene Mapping Workshop half-sibling linkage map. Animal Genetics 34:161-168
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=12755815&dopt=Abstract

2002 Publications

Chowdhary, B.P.; Raudsepp, T.; Honeycutt, D.; Owens, E.K.; Piumi, F.; Guérin, G.; Matise, T.C.; Kata, S.R.; Womack, J.E.; Skow, L.C. (2002) Construction of a 5000rad whole-genome radiation hybrid panel in the horse and generation of a comprehensive and comparative map for ECA11. Mammalian Genome 13:89-94.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=11889556&dopt=Abstract

Milenkovic, D.; Oustry-Vaiman, A.; Lear, T.L.; Billault, A.; Mariat, D.; Piumi, F.; Schibler, L.; Cribiu, E.; Guérin, G. (2002) Cytogenetic localization of 136 genes in the horse: comparative mapping with the human genome. Mammalian Genome 13:524-534
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=12370783&dopt=Abstract

Raudsepp, T.; Kata, S.R.; Piumi, F.; Swinburne, J.; Womack, J.E.; Skow, L.C.; Chowdhary, B.P. (2002) Conservation of Gene Order bewtween Horse and Human X Chromosomes as Evidenced through Radiation Hybrid Mapping. Genomics 78:451-456.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=11863376&dopt=Abstract

2001 Publications

Vilà, C.; Leonard, J.A.; Götherström, A.; Marklund, S.; Sandberg, K.; Lidén, K.; Wayne, R.K.; Ellegren, H. (2001) Widespread Origins of Domestic Horse Lineages. Science 291:474-477.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=11161199&dopt=Abstract

2000 Publications

Kiguwa, S.L.; Hextall, P.; Smith, A.L.; Critcher, R.; Swinburne, J.; Million, L.; Binns, M.M.; Goodfellow, P.N.; McCarthy, L.C.; Farr, C.J.; Oakenfull, E.A. (2000) A horse whole-genome-radiation hybrid panel: Chromosome 1 and 10 preliminary maps. Mammalian Genome 11:803-805.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=10967144&dopt=Abstract

Swinburne, J.; Gerstenberg, C.; Breen, M.; Aldridge, V.; Lockhart, L.; Marti, E.; Antczak, D.; Eggleston-Stott, M.; Bailey, E.; Mickelson, J.; Røed, K.; Lindgren, G.; van Haeringen, W.; Guérin, G.; Bjornason, J.; Allen, W.R.; Binns, M. (2000) First comprehensive low-density horse linkage map based on two, three-generation, full-sibling, cross-bred horse reference families. Genome 66:123-134.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=10860657&dopt=Abstract

1999 Publications

Caetano, A.R.; Shiue, Y.; Lyons, L.A.; O'Brien, S.J.; Laughlin, T.F.; Bowling, A.T.; Murray, J.D. (1999) A Comparative Gene Map of the Horse (Equus caballus). Genome Research 9:1239-1249
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=10613847&dopt=Abstract

Guérin, G.; Bailey, E.; Bernoco, D.; Anderson, I.; Antczak, D.F.; Bell, K.; Binns, M.M., Bowling, A.T.; Brandon, R.; Cholewinski, G.; Cothran, E.G.; Ellegren, H.; Förster, M.; Godard, S.; Horin, P.; Ketchum, M.; Lindgren, G.; McPartlan, H.; Mériaux, J-C.; Mickelson, J.R.; Millon, L.V.; Murray, J.; Neau,A.; Røed, K.; Sandberg, K.; Shiue,Y-L.; Skow, L.C.; Stott, M.; Swinburne, J.; Valberg, S.J.; van Haeringen, H.; van Haeringen, W.A.; Zeigle, J. (1999) Report of the International Equine Gene Mapping Workshop: Male Linkage Map. Animal Genetics 30:341-354.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=10582279&dopt=Abstract

Shiue, Y-L.; Bickel, L.A.; Caetano, A.R.; Millon, L.5V.; Clark, R. S.; Eggleston, M.L.; Michelmore, R.; Bailey, E.; Guérin, G.; Godard, S.; Mickelson, J.R.; Valberg, S.J.; Murray, J.D.; Bowling A.T. (1999) A synteny map of the horse genome comprised of 240 microsatellite and RAPD markers. Animal Genetics 30:1-10.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=10050277&dopt=Abstract

1998 Publications

Lindgren G.; Sandberg K.; Persson H.; Marklund S.; Breen M.; Sandgren B.; Carlstén J.; Ellegren H. (1998) A primary male autosomal linkage map of the horse genome. Genome Research 8:951-966.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=9750194&dopt=Abstract

1997 Publications

ISCNH. International system for cytogenetic nomenclature of the domestic horse. Bowling, A.T.; Breen, M.; Chowdhary, B.P.; Hirota, K.; Lear, T.L.; Millon, L.V.; Ponce de Leon, F.A.; Raudsepp, T.; Stranzinger, G. (Committee). (1997) Chromosome Research 5:443-453.
Imageshttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=9421259&dopt=Abstract

1996 Publications

Raudsepp, T.; Frönicke, L.; Scherthan, H.; Gustavsson, I.; Chowdhary, B.P. (1996). Zoo-FISH delineates conserved chromosomal segments in horse and man. Chromosome Research 4:1-8.
Imageshttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=8793207&dopt=Abstract

Xu, X.; Gullberg, A.; Arnason U. (1996) The Complete Mitochondrial DNA (mtDNA) of the Donkey and mtDNA Comparisons Among Four Closely Related Mammalian Species-Pairs. Journal of Molecular Evolution 43(5):438-46.
PDF Filehttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=8875857&dopt=Abstract