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Maps
Horse Map Viewer: Developed by Aaron K. Wong, Stephanie J Bricker and Lee V. Millon at the Veterinary Genetics Laboratory of the University of California, Davis. Funding was provided by the Veterinary Genetics Laboratory and by the USDA-NRSP8 Horse Species Coordinator's Fund. Contact: Lee V. Millon lvmillon@ucdavis.edu Swinburne JE, Boursnell M, Hill G, Pettitt L, Allen T, Chowdhary B, Hasegawa T, Kurosawa M, Leeb T, Mashima S, Mickelson JR, Raudsepp T, Tozaki T, Binns M. (2006) Single linkage group per chromosome genetic linkage map for the horse, based on two three-generation, full-sibling, crossbred horse reference families. Genomics 87:1-29 M.C.T. Penedo, L.V. Millon, D. Bernoco, E. Bailey, M. Binns, G. Cholewinski, N. Ellis, J. Flynn, B. Gralak, A. Guthrie, T. Hasegawa, G. Lindgren, L.A. Lyons, K.H. Røed, J.E. Swinburne, T. Tozaki (2005) International equine gene mapping workshop report: a comprehensive linkage map constructed with data from new markers and by merging four mapping resources. Cytogenetic and Genome Research 111:5–15 Chowdhary, B.P.; Raudsepp, T.; Kata, S.R.; Goh, G.; Millon, L.V.; Allan, V.; Piumi, F.; Guérin, G.; Swinbyrne, J.; Binns, M.; Lear, T.L.; Mickelson, J.; Murray, J.; Antczak, D.F.; Womack, J.E.; Skow, L.C. (2003) The First-Generation Whole-Genome Radiation Hybrid Map in the Horse Identifies Conserved Segments in Human and Mouse Genomes. Genome Research 13:742-751 Guérin, G.; Bailey, E.; Bernoco, D.; Anderson, I.; Antczak, D.F.; Bell, K.; Biros, I.; Bjørnstad, G.; Bowling, A.T.; Brandon, R.; Caetano, A.R.; Cholewinski, G.; Colling, D.; Eggleson, M.; Ellis, N.; Flynn, J.; Gralak, B.; Hasegawa, T.; Ketchum, M.; Lindgren, G.; Lyons, L.A.; Millon, L.V.; Mariat, D.; Murray, J.; Neau, A.; Røed, K.; Sandberg, K.; Skow, L.C.; Tammen, I.; Tozaki, T.; VanDyk, E.; Weiss, B.; Young, A.; Ziegle, J. (2003) The second generation of the International Equine Gene Mapping Workshop half-sibling linkage map. Animal Genetics 34:161-168 Chowdhary, B.P.; Raudsepp, T.; Honeycutt, D.; Owens, E.K.; Piumi, F.; Guérin, G.; Matise, T.C.; Kata, S.R.; Womack, J.E.; Skow, L.C. (2002) Construction of a 5000rad whole-genome radiation hybrid panel in the horse and generation of a comprehensive and comparative map for ECA11. Mammalian Genome 13:89-94. Milenkovic, D.; Oustry-Vaiman, A.; Lear, T.L.; Billault, A.; Mariat, D.; Piumi, F.; Schibler, L.; Cribiu, E.; Guérin, G. (2002) Cytogenetic localization of 136 genes in the horse: comparative mapping with the human genome. Mammalian Genome 13:524-534 Raudsepp, T.; Kata, S.R.; Piumi, F.; Swinburne, J.; Womack, J.E.; Skow, L.C.; Chowdhary, B.P. (2002) Conservation of Gene Order bewtween Horse and Human X Chromosomes as Evidenced through Radiation Hybrid Mapping. Genomics 78:451-456. Vilà, C.; Leonard, J.A.; Götherström, A.; Marklund, S.; Sandberg, K.; Lidén, K.; Wayne, R.K.; Ellegren, H. (2001) Widespread Origins of Domestic Horse Lineages. Science 291:474-477. Kiguwa, S.L.; Hextall, P.; Smith, A.L.; Critcher, R.; Swinburne, J.; Million, L.; Binns, M.M.; Goodfellow, P.N.; McCarthy, L.C.; Farr, C.J.; Oakenfull, E.A. (2000) A horse whole-genome-radiation hybrid panel: Chromosome 1 and 10 preliminary maps. Mammalian Genome 11:803-805. Swinburne, J.; Gerstenberg, C.; Breen, M.; Aldridge, V.; Lockhart, L.; Marti, E.; Antczak, D.; Eggleston-Stott, M.; Bailey, E.; Mickelson, J.; Røed, K.; Lindgren, G.; van Haeringen, W.; Guérin, G.; Bjornason, J.; Allen, W.R.; Binns, M. (2000) First comprehensive low-density horse linkage map based on two, three-generation, full-sibling, cross-bred horse reference families. Genome 66:123-134. Caetano, A.R.; Shiue, Y.; Lyons, L.A.; O'Brien, S.J.; Laughlin, T.F.; Bowling, A.T.; Murray, J.D. (1999) A Comparative Gene Map of the Horse (Equus caballus). Genome Research 9:1239-1249 Guérin, G.; Bailey, E.; Bernoco, D.; Anderson, I.; Antczak, D.F.; Bell, K.; Binns, M.M., Bowling, A.T.; Brandon, R.; Cholewinski, G.; Cothran, E.G.; Ellegren, H.; Förster, M.; Godard, S.; Horin, P.; Ketchum, M.; Lindgren, G.; McPartlan, H.; Mériaux, J-C.; Mickelson, J.R.; Millon, L.V.; Murray, J.; Neau,A.; Røed, K.; Sandberg, K.; Shiue,Y-L.; Skow, L.C.; Stott, M.; Swinburne, J.; Valberg, S.J.; van Haeringen, H.; van Haeringen, W.A.; Zeigle, J. (1999) Report of the International Equine Gene Mapping Workshop: Male Linkage Map. Animal Genetics 30:341-354. Shiue, Y-L.; Bickel, L.A.; Caetano, A.R.; Millon, L.5V.; Clark, R. S.; Eggleston, M.L.; Michelmore, R.; Bailey, E.; Guérin, G.; Godard, S.; Mickelson, J.R.; Valberg, S.J.; Murray, J.D.; Bowling A.T. (1999) A synteny map of the horse genome comprised of 240 microsatellite and RAPD markers. Animal Genetics 30:1-10. Lindgren G.; Sandberg K.; Persson H.; Marklund S.; Breen M.; Sandgren B.; Carlstén J.; Ellegren H. (1998) A primary male autosomal linkage map of the horse genome. Genome Research 8:951-966. ISCNH. International system for cytogenetic nomenclature of the domestic horse. Bowling, A.T.; Breen, M.; Chowdhary, B.P.; Hirota, K.; Lear, T.L.; Millon, L.V.; Ponce de Leon, F.A.; Raudsepp, T.; Stranzinger, G. (Committee). (1997) Chromosome Research 5:443-453. Raudsepp, T.; Frönicke, L.; Scherthan, H.; Gustavsson, I.; Chowdhary, B.P. (1996). Zoo-FISH delineates conserved chromosomal segments in horse and man. Chromosome Research 4:1-8. Xu, X.; Gullberg, A.; Arnason U. (1996) The Complete Mitochondrial DNA (mtDNA) of the Donkey and mtDNA Comparisons Among Four Closely Related Mammalian Species-Pairs. Journal of Molecular Evolution 43(5):438-46. |
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