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BioinformaticsBIO520
Biology, Genes, Genetics
DNA Sequence Manipulations
DNA Sequence Manipulations
GATC to Gene
Gene Regulatory Sequences
Protein Structure and Function
Protein Characterization
ALIGNMENT
Real Alignments
Similarity, cont’d!
Protein Analyses
RNA Structure Prediction
Nucleic Acid InteractionsPracticalities
Protein Structure Prediction
Protein Structure
Evolutionary Biology Concepts
Phylogenetic Inference
DNA Sequencing
Genome Characterization
Trait Mapping
Cloning Human Genes
Proteome
Gene KnockoutsGenome Projects
Genome ProjectsGenome Analyses
Medical Informatics
BioinformaticsApplications

Lecture Topics/Broadcast Schedule

1. Introduction to Bioinformatics
2. Biological Principles
3. Genes, Genomes, Proteins, and Cell Biology!
4. DNA Sequence Manipulations
5. Gene Finding:  Fundamentals and Principles
6. Consensus Sequences:  Inference and Use
7. Proteins:  Characterization
8. Protein Structure:  Fundamental Principles
9. Protein Sequence Alignment
10. Database and Multiple Alignment
11. Alignment Interpreation
12. RNA Structure Prediction
13. Protein Structure Prediction
14. Protein Structure Prediction and Ligand Docking
15. Evolutionary Biology:  Basic Priniciples
16. Evolutionary Biology:  Phylogenetic Inference
17. Genome Sequencing:  DNA sequence projects from raw data to finished genome
18. Physical Mapping of DNA
19. Trait Mapping:  correlating phenotypes to genotypes to maps
20. Candidate Genes/Quantitative Trait Loci/ Modern Linkage Mapping
21. Transcriptomes
22. Proteomes
23. Genome Projects:  Current Extensions
    • Gene Knockouts
    • Protein-protein interactions
24. Genome-wide Bioinformatic Analyses:  Methods and Results
25. Medical Informatics
26. Application$ of Bioinformatics
27. Class Project Presentations and Discussion
28. Class Project Presentations and Discussion

Chuck Staben, copyright reserved || 10/26/98