RNA Structure Prediction

Table of Contents

RNA Structure Prediction

EXAM 1

Seqanal 2

RNA structures

RNA Modifications

2° Structure

Tertiary Structure

“The Rules”

Base Pairs/Stacks

Base Pairing/Stacking

Hairpin Loops(GC closure)

Internal Loops

Single-Strand Bulges

Prediction Programs

Squiggles

DOMES, MOUNTAIN, CIRCLES

ENERGY PLOT

P-Num Plot

Prediction Quality

Goals

Active RNAs

Email: staben@pop.uky.edu

Home Page: www.uky.edu/Classes/BIO520/BIO520WWW/

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