GATC to Gene

Table of Contents

GATC to Gene

Protein Coding Genes

GenomesGene Content

GenomesGene Content

Repetitive DNA

Prokaryotic Gene Expression

ORFs

ORF finding tools

ORF Characteristics

Nucleotide Bias

Codon Bias

Codon Bias

Codon Bias Gene Differences

Codon BiasOrganism Differences

Codon BiasOrganism Differences

Eukaryotic Gene Expression

Eukaryotic Gene Complexity

Eukaryotes, cont’d

Intron Prevalence

Intron Size

Exon Size

Yeast

Fungi

Exon/Intron Structure

Alternative Splice

Consensus Sequences

Splicing Consensus

Translation Initiation Sites

Codon Bias-useful?

Protein Database Matches

Linguistic Approach

Tools-GCG

Tools-WWW

Accuracy Assessment

Accuracy Levels

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Email: staben@pop.uky.edu

Home Page: www.uky.edu/Classes/BIO520/BIO520WWW/

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