@text
Kinemage Supplement to Branden & Tooze "Introduction to Protein Structure"
Chapter 2 - MOTIFS OF PROTEIN STRUCTURE

		Contents of file CH2MOTIF.KIN:
Kin.1- Alpha helix, end-on as helical wheel and in context (Fig. 2.4b)
Kin.2- Calpha backbone of thioredoxin, highlighting mixed beta sheet (Fig. 2.7a)
Kin.3- H-bonding in the mixed beta sheet of thioredoxin (Fig. 2.7b)
Kin.4- Ribonuclease - all-atom and mainchain-Hbond representations (Fig. 2.9)
Kin.5- Ribonuclease - Calpha-SS and smooth-spline representations (Fig. 2.9)
Kin.6- Ca++ binding loops of calmodulin: overview and detail (Fig. 2.13c, 2.13b)
Kin.7- Handedness of crossover connections in beta sheet (Fig. 2.17, 2.18)
Kin.8- Triose P isomerase as 4 beta-alpha-beta-alpha units (Fig. 2.20)

	The 3-dimensional structures of proteins are each quite different in detail, but they often repeat common motifs, both for elements of secondary structure such as helices and beta sheets and for the overall organization of entire subunits or domains.

	Kinemage 1 shows an individual alpha-helix, viewed from the N-terminal end to resemble the "helix wheel" diagrams of Fig. 2.4 in the book.  The main chain is white, the hydrophobic sidechains are seagreen, polar ones are skyblue, and charged ones are red.  This is a typical globular-protein helix, which has one side toward the solvent with mainly polar residues, and the other side toward the protein interior with mainly hydrophobic residues.  Choose View2 or View3 to see more of the structure, which provides the context to understand the distribution of amino acids along the helix.  This example is alcohol dehydrogenase 354-365, as in Fig. 2.4b.

	Kinemage 2 shows the overall Calpha backbone of thioredoxin, to illustrate a protein built around a beta sheet (in pink).  In this case the sheet is a mixed one, containing both parallel and antiparallel beta strand pairs.  View1, from one edge of the sheet, shows that it is rather strongly twisted, in a righthanded direction, as is typical for all types of beta sheet.  Each strand can be seen to zigzag back and forth at alternate Calphas; this is why beta sheet is called "beta pleated sheet", and it makes the sidechains alternately stick out to one side of the sheet and then the other.

	Kinemage 3 is a more detailed view of the mixed beta sheet from thioredoxin, showing all atoms of the main chain, blue and red markers on the peptide N and O atoms, and the hydrogen bonds between strands in the beta sheet.  For the antiparallel strand pairs those H-bonds come in pairs that alternate narrow and wide spacing and are approximately perpendicular to the strands.  For the parallel pairs, the H-bonds are evenly spaced but lie along alternating diagonals.  Each set may be turned on or off separately.

	Kinemages 4 and 5 each show two quite different representations of the structure of ribonuclease A, similar in concept but not in detail to the representations of myoglobin shown in Fig. 2.9.  In kinemage 4, the all-atom image includes mainchain, sidechain, and hydrogen atoms, in different shades of blue, for one half of the molecule and just mainchain and sidechains for the other half.  The other image shows mainchain atoms and mainchain Hbonds.  Click "ANIMATE" to cycle between them.  View2 shows the active site cleft in the all-atom representation, and View3 zooms in on the part with the hydrogens.  Although hydrogens are about half the atoms in a protein and make almost all of the contacts, they are seldom shown explicitly because they are hard to detect with xray crystallography (they have a very low density of electrons) and they very much complicate the picture.  Even for NMR structures, where proton positions are a primary part of the data, they are only rarely shown in pictures of the structure.  Similarly, the solvent molecules and the alternate conformations of sidechains are typically left off, as we have done here.  This ribonuclease file was chosen because it is a joint xray-neutron diffraction structure, for which hydrogens are always included.
	Kinemage 5 shows the structure of ribonuclease in two additional ways - a simple Calpha+SS representation and a smoothed spline representation (gold helices and seagreen beta strands).  Animate to switch between them, and try View2 also, which shows the helices well.  The spline is like a thin ribbon-drawing, and is depth-cued by changing line width.  Computer-drawn ribbons are usually done with at least 3 parallel strands and at least 4 short segments per residue for smoothness.  They are one of the few cases where adding many more lines gives a simpler-looking and more comprehensible picture; however, we don't use them in this supplement because there are 12x as many lines in such a minimal ribbon as in the Calpha image.

	Kinemage 6 shows the Calpha backbone of the calcium-regulatory protein calmodulin, showing that it is made up of four "EF hand" Calcium-binding motifs.  E helices are pink, Ca-binding loops are seagreen, F helices are skyblue, and Ca++ are yellowtint crosses.  Within each motif, the E and F helices are nearly perpendicular to each other, joined by a loop which provides ligands to the Ca++.  Animate for a tour, in increasing detail.  In the starting view the top domain has an orientation similar to the troponin C in Fig. 2-13c, while in View2 the bottom domains match.  Both calmodulin and troponin have an unusual, long, exposed alpha-helix joining their two halves.  The third view shows the twofold relationship between the 2 sites in one half of the molecule, while the final view is a closeup of Ca++ site IV and its ligands in the loop (similar to Fig. 2.13b).  One of the sidechain carboxyl-group ligands is from the first turn of helix F, while the other carboxyls and one backbone CO ligand are from the loop.

	Kinemage 7 shows a parallel beta sheet, with righthanded (yellow) vs lefthanded (gold) crossover connections.  (The handedness is defined as that of a spiral that approximately follows the path of beta-connection-beta.)  Many crossovers, including this one, contain a helix and are called beta-alpha-beta motifs.  Out of the many hundreds of crossover connections in the known protein structures, all are righthanded except for one very well-established case in subtilisin and a recent example in cyclophilin (1CPL).  This regularity is an important feature of the overall organization of the alpha/beta proteins, such as in Kin. 8.

	Kinemage 8 shows the alpha/beta barrel of triose phosphate isomerase (TIM), built up from four beta-alpha-beta-alpha motifs that are consecutive both in the amino acid sequence and in the 3-dimensional structure - colored yellow, red, green, and blue to approximately match Fig. 2.20.  In the starting animation frame, either the baba units or the central beta barrel and the crossover loops can be turned on and off separately.  Click successively on the "ANIMATE" button to see the structure built up from the N to the C terminus.  View1 is from the end of the barrel and View2 from the side of the barrel.  (from PDB file 1TIM)

@kinemage 1
@caption (B&T Fig. 2.4b)
A typical globular-protein helix, with a hydrophilic side toward solvent (red charged and skyblue polar sidechains) and a hydrophobic side toward the rest of the protein (seagreen sidechains).  The startup view is a closeup from one end of the helix, like a "helical wheel".  To see the context, choose View2 or View3.  (from PDB file 8ADH)
@onewidth 
@zoom 3.24 
@zslab 230 
@center 13.486 4.264 13.868 
@matrix 
-.303665 .88621 -.349884 .890394 .394651 .226825 .339096 -.242655 -.908918
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@2matrix 
-.365993 .873622 -.320677 .871655 .442513 .21071 .325984 -.202401 -.923454 
@3zoom 1.83
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@3matrix 
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@group {ADH rest} 
@vectorlist {Calphas} color= white 
{ca ser 1}P -5.069 26.373 -5.828
{ca thr 2}-6.036 23.671 -3.456
{ca ala 3}-7.71 26.285 -1.341
{ca gly 4}-11.22 24.715 -1.559
{ca lys 5}-10.922 21.007 -2.459
{ca val 6}-9.444 17.617 -1.693
{ca ile 7}-5.655 17.146 -1.643
{ca lys 8}-3.631 14.105 -2.62
{ca cys 9}-0.479 13.538 -0.627
{ca lys 10}1.414 10.796 1.1
{ca ala 11}0.858 9.887 4.745
{ca ala 12}2.233 7.052 6.975
{ca val 13}-0.829 4.81 7.554
{ca leu 14}-0.907 2.065 10.288
{ca trp 15}-3.394 -0.484 8.999
{ca glu 16}-2.696 -3.072 11.663
{ca glu 17}-1.007 -3.253 15.084
{ca lys 18}2.641 -4.276 15.192
{ca lys 19}3.084 -3.54 11.499
{ca pro 20}5.399 -0.896 10.039
{ca phe 21}3.956 2.318 8.689
{ca ser 22}2.839 2.157 5.092
{ca ile 23}3.78 5.199 2.964
{ca glu 24}0.436 5.59 1.147
{ca glu 25}-1.457 7.957 -1.086
{ca val 26}-4.429 9.442 0.672
{ca glu 27}-6.833 12.252 -0.035
{ca val 28}-7.336 15.029 2.484
{ca ala 29}-10.8 16.668 2.382
{ca pro 30}-11.079 20.471 2.682
{ca pro 31}-11.688 21.916 6.142
{ca lys 32}-15.28 22.267 7.391
{ca ala 33}-16.286 25.091 9.763
{ca his 34}-13.651 25.719 12.446
{ca glu 35}-11.214 23.217 10.905
{ca val 36}-7.846 24.329 9.541
{ca arg 37}-5.693 22.583 6.898
{ca ile 38}-1.975 22.546 7.482
{ca lys 39}1.017 21.643 5.361
{ca met 40}3.553 19.852 7.594
{ca val 41}7.169 21.008 7.6
{ca ala 42}8.426 18.622 10.289
{ca thr 43}7.201 16.179 12.871
{ca gly 44}9.026 14.577 15.81
{ca ile 45}8.666 10.887 16.591
{ca cys 46}7.485 10.522 20.213
{ca arg 47}7.293 7.406 22.315
{ca ser 48}3.49 7.634 22.519
{ca asp 49}3.225 7.128 18.71
{ca asp 50}4.989 3.757 19.101
{ca his 51}2.457 2.741 21.817
{ca val 52}-0.268 3.054 19.107
{ca val 53}1.817 0.561 17.184
{ca ser 54}2.078 -1.951 20.027
{ca gly 55}-1.665 -1.825 20.761
{ca thr 56}-0.792 -0.464 24.21
{ca leu 57}-2.464 2.856 23.515
{ca val 58}-5.798 1.775 22.027
{ca thr 59}-7.195 3.948 19.274
{ca pro 60}-9.233 3.162 16.159
{ca leu 61}-7.203 1.619 13.277
{ca pro 62}-6.323 2.241 10.568
{ca val 63}-5.022 5.602 11.634
{ca ile 64}-2.536 8.325 10.875
{ca ala 65}-0.39 8.813 14.023
{ca gly 66}1.965 11.652 15.006
{ca his 67}1.194 14.656 17.26
{ca glu 68}4.427 16.522 17.736
{ca ala 69}4.874 18.878 14.795
{ca ala 70}4.922 22.279 13.28
{ca gly 71}3.56 23.472 9.924
{ca ile 72}2.119 26.224 7.747
{ca val 73}-1.597 26.884 7.196
{ca glu 74}-2.895 26.125 3.69
{ca ser 75}-6.627 26.852 4.116
{ca ile 76}-9.072 27.515 6.989
{ca gly 77}-12.796 26.609 6.999
{ca glu 78}-15.745 28.8 7.889
{ca gly 79}-15.706 30.7 11.13
{ca val 80}-11.924 30.493 11.737
{ca thr 81}-10.377 33.587 13.327
{ca thr 82}-7.134 32.528 14.978
{ca val 83}-5.07 31.506 11.94
{ca arg 84}-4.709 32.728 8.374
{ca pro 85}-3.328 30.845 5.369
{ca gly 86}0.462 31.197 5.447
{ca asp 87}0.673 31.379 9.258
{ca lys 88}3.133 29.164 11.149
{ca val 89}1.442 26.734 13.518
{ca ile 90}1.742 23.851 15.886
{ca pro 91}-1.134 21.405 16.146
{ca leu 92}-2.249 20.684 19.765
{ca phe 93}-2.704 17.122 21.053
{ca thr 94}-4.396 18.659 24.087
{ca pro 95}-7.02 21.096 22.987
{ca gln 96}-8.157 24.393 24.36
{ca cys 97}-11.95 24.624 23.722
{ca gly 98}-11.817 27.571 26.052
{ca lys 99}-15.222 26.789 27.627
{ca cys 100}-15.215 23.524 29.598
{ca arg 101}-14.981 23.235 33.357
{ca val 102}-11.295 22.654 32.728
{ca cys 103}-10.492 25.514 30.327
{ca lys 104}-12.019 27.991 32.752
{ca his 105}-10.157 26.542 35.778
{ca pro 106}-6.991 28.559 36.439
{ca glu 107}-4.821 25.502 36.68
{ca gly 108}-6.537 22.734 34.731
{ca asn 109}-5.263 22.137 31.189
{ca phe 110}-6.674 18.719 30.176
{ca cys 111} -9.392 20.136 27.994
{ca leu 112}-12.547 18.025 28.092
{ca lys 113}-12.736 18.038 24.242
{ca asn 114}-9.624 15.809 24.106
{ca asp 115}-9.511 12.482 22.208
{ca leu 116}-7.079 10.653 24.569
{ca ser 117}-9.533 9.52 27.282
{ca met 118}-12.079 7.633 25.163
{ca pro 119}-10.472 7.671 21.705
{ca arg 120}-12.731 8.177 18.729
{ca gly 121}-10.078 8.935 16.074
{ca thr 122}-12.337 11.485 14.441
{ca met 123}-12.683 15.264 14.157
{ca gln 124}-14.94 17.123 16.679
{ca asp 125}-17.833 16.339 14.341
{ca gly 126}-17.139 12.619 14.551
{ca thr 127}-16.022 12.347 10.917
{ca ser 128}-12.66 11.534 9.351
{ca arg 129}-11.085 13.917 6.773
{ca phe 130}-8.888 11.093 5.365
{ca thr 131}-9.47 8.263 2.858
{ca cys 132}-7.046 5.797 1.268
{ca arg 133}-8.578 4.501 -1.933
{ca gly 134}-12.219 4.791 -0.811
{ca lys 135}-11.273 3.634 2.721
{ca pro 136}-11.706 6.054 5.66
{ca ile 137}-8.548 6.537 7.788
{ca his 138}-8.799 7.677 11.453
{ca his 139}-7.207 10.741 13.027
{ca phe 140}-4.845 10.615 16.009
{ca leu 141}-5.665 13.017 18.865
{ca gly 142}-7.069 15.679 16.516
{ca thr 143}-3.564 15.809 15.022
{ca ser 144}-2.438 13.03 12.564
{ca thr 145}0.921 14.647 11.83
{ca phe 146}2.483 11.705 9.883
{ca ser 147}0.892 13.209 6.718
{ca gln 148}2.055 15.887 4.2
{ca tyr 149}-1.314 17.571 4.928
{ca thr 150}-3.671 17.255 7.901
{ca val 151}-6.891 18.833 9.09
{ca val 152}-7.271 19.96 12.702
{ca asp 153}-10.114 21.679 14.612
{ca glu 154}-9.346 25.31 15.583
{ca ile 155}-9.075 24.469 19.29
{ca ser 156}-6.276 22.054 18.358
{ca val 157}-4.01 24.594 16.703
{ca ala 158}-1.712 27.4 17.801
{ca lys 159}-0.339 30.257 15.723
{ca ile 160}3.367 30.924 16.46
{ca asp 161}6.098 33.417 15.476
{ca ala 162}6.471 33.737 11.716
{ca ala 163}10.26 33.679 11.973
{ca ser 164}10.249 30.287 13.679
{ca pro 165}12.552 27.495 12.628
{ca leu 166}9.805 24.824 12.306
{ca glu 167}12.375 22.012 12.171
{ca lys 168}13.332 22.854 15.735
{ca val 169}10.191 24.327 17.39
{ca cys 170}8.15 21.209 16.514
{ca leu 171}9.554 20.006 19.873
{ca ile 172}7.222 22.491 21.672
{ca gly 173}4.425 20.191 20.444
{ca cys 174}5.057 17.415 22.976
{ca gly 175}8.505 16.375 24.164
{ca phe 176}9.823 19.75 25.275
{ca ser 177}6.699 21.286 26.738
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{ca ser 324}-2.051 24.624 25.24
{ca lys 325}-3.31 27.455 23.033
{ca asp 326}-2.243 30.128 25.463
{ca ser 327}1.198 28.733 26.101
{ca val 328}2.63 27.258 22.934
{ca pro 329}2.955 30.728 21.403
{ca lys 330}4.866 31.808 24.502
{ca leu 331}7.391 28.952 24.483
{ca val 332}8.279 29.907 20.813
{ca ala 333}8.634 33.546 21.861
{ca asp 334}11.001 32.557 24.666
{ca phe 335}12.974 30.351 22.285
{ca met 336}13.112 33.147 19.731
{ca ala 337}14.448 35.27 22.597
{ca lys 338}17.515 33.003 23.053
{ca lys 339}15.993 31.969 26.322
{ca phe 340}16.349 28.178 26.036
{ca ala 341}17.984 26.073 23.285
{ca leu 342}16.384 23.137 21.495
{ca asp 343}19.236 21.699 19.47
{ca pro 344}20.756 19.467 22.141
{ca leu 345}17.651 17.324 21.92
{ca ile 346}17.627 16.834 18.107
{ca thr 347}19.874 13.876 17.525
{ca his 348}18.471 12.843 14.196
{ca val 349}16.836 14.42 11.158
{ca leu 350}15.574 11.92 8.566
{ca pro 351}13.471 12.712 5.487
{ca phe 352}9.841 11.7 6.159
{ca glu 353}9.737 8.71 3.759
{ca lys 354}12.132 6.961 6.145
{ca gly 365}P 17.983 3.047 21.622
{ca glu 366}19.798 6.296 21.728
{ca ser 367}17.95 8.675 19.627
{ca ile 368}17.217 11.551 22.042
{ca arg 369}14.876 12.899 19.326
{ca thr 370}14.258 12.137 15.659
{ca ile 371}12.754 14.893 13.503
{ca leu 372}11.039 13.906 10.242
{ca thr 373}11.086 16.594 7.522
{ca phe 374}8.54 16.854 4.712
@group {ADH helix} 
@vectorlist {main ch} color= white 
{ca lys 354}P 12.132 6.961 6.145
{c lys 354}11.621 6.909 7.619
{o lys 354}12.462 6.808 8.509
{c lys 354}P 11.621 6.909 7.619
{n ile 355}10.319 6.982 7.829
{ca ile 355}9.626 6.945 9.097
{c ile 355}9.983 5.737 9.968
{o ile 355}10.493 5.883 11.067
{c ile 355}P 9.983 5.737 9.968
{n asn 356}9.723 4.569 9.456
{ca asn 356}9.951 3.273 10.079
{c asn 356}11.368 3.171 10.59
{o asn 356}11.618 2.393 11.51
{c asn 356}P 11.368 3.171 10.59
{n glu 357}12.242 3.924 9.961
{ca glu 357}13.673 3.92 10.326
{c glu 357}13.923 4.74 11.583
{o glu 357}14.862 4.491 12.348
{c glu 357}P 13.923 4.74 11.583
{n gly 358}13.094 5.745 11.707
{ca gly 358}13.083 6.691 12.807
{c gly 358}12.589 5.919 14.063
{o gly 358}13.187 6.119 15.129
{c gly 358}P 12.589 5.919 14.063
{n phe 359}11.613 5.104 13.849
{ca phe 359}10.968 4.279 14.83
{c phe 359}11.931 3.224 15.343
{o phe 359}11.741 2.791 16.483
{c phe 359}P 11.931 3.224 15.343
{n asp 360}12.88 2.833 14.542
{ca asp 360}13.888 1.836 14.928
{c asp 360}14.874 2.499 15.898
{o asp 360}15.253 1.882 16.912
{c asp 360}P 14.874 2.499 15.898
{n leu 361}15.276 3.689 15.555
{ca leu 361}16.202 4.539 16.293
{c leu 361}15.624 4.787 17.71
{o leu 361}16.32 4.88 18.679
{c leu 361}P 15.624 4.787 17.71
{n leu 362}14.316 4.901 17.756
{ca leu 362}13.484 5.125 18.887
{c leu 362}13.364 3.839 19.767
{o leu 362}13.675 3.895 20.953
{c leu 362}P 13.364 3.839 19.767
{n arg 363}12.914 2.807 19.141
{ca arg 363}12.627 1.521 19.709
{c arg 363}13.732 0.797 20.412
{o arg 363}13.502 0.145 21.466
{c arg 363}P 13.732 0.797 20.412
{n ser 364}14.909 0.867 19.887
{ca ser 364}16.051 0.146 20.502
{c ser 364}17.151 1.175 20.405
{o ser 364}17.9 1.194 19.411
{c ser 364}P 17.151 1.175 20.405
{n gly 365}17.137 2.036 21.421
{ca gly 365}17.983 3.047 21.622
@vectorlist {Hbonds} color= brown 
{gly 358 hn} P U 12.418 5.861 10.979
{lys 354 o} U 12.449 6.524 9.25
{phe 359 hn} P U 11.285 5.052 12.906
{ile 355 o} U 10.731 5.634 11.619
{n asp 360}P U 12.613 2.74 13.901
{o asn 356}U 11.885 2.486 12.151
{leu 361 hn} P U 14.901 4.038 14.696
{glu 357 o} U 14.874 4.355 13.052
{leu 362 hn} P U 13.833 4.821 16.884
{gly 358 o} U 13.381 5.73 15.656
{arg 363 hn} P U 12.753 2.93 18.162
{phe 359 o} U 12.045 2.833 16.987
{ser 364 hn} P U 15.01 1.421 19.061
{asp 360 o} U 15.18 1.744 17.557
@subgroup {side ch} 
@vectorlist {charged} color= red 
{ca lys 354}P 12.132 6.961 6.145
{cb lys 354}13.59 7.346 6.247
{cg lys 354}14.547 6.919 5.162
{cd lys 354}15.532 8.004 4.738
{ce lys 354}16.897 7.427 4.248
{nz lys 354}17.902 8.56 4.428
{ca glu 357}P 13.673 3.92 10.326
{cb glu 357}14.508 4.587 9.226
{cg glu 357}15.065 3.664 8.177
{cd glu 357}16.162 4.188 7.292
{oe1 glu 357}16.239 3.646 6.186
{cd glu 357}P 16.162 4.188 7.292
{oe2 glu 357}16.902 5.098 7.68
{ca asp 360}P 13.888 1.836 14.928
{cb asp 360}14.582 1.27 13.705
{cg asp 360}13.644 0.349 12.922
{od1 asp 360}13.966 0.008 11.8
{cg asp 360}P 13.644 0.349 12.922
{od2 asp 360}12.603 -0.011 13.519
{ca arg 363}P 12.627 1.521 19.709
{cb arg 363}11.941 0.564 18.671
{cg arg 363}10.533 0.965 18.475
{cd arg 363}9.575 0.186 17.749
{ne arg 363}9.956 -0.022 16.36
{cz arg 363}9.07 0.247 15.384
{nh1 arg 363}7.831 0.66 15.689
{cz arg 363}P 9.07 0.247 15.384
{nh2 arg 363}9.537 0.16 14.132
@vectorlist {polar} color= sky 
{ca asn 356}P 9.951 3.273 10.079
{cb asn 356}9.616 2.098 9.156
{cg asn 356}8.178 2.075 8.776
{od1 asn 356}7.259 2.117 9.622
{cg asn 356}P 8.178 2.075 8.776
{nd2 asn 356}7.839 2.059 7.468
{ca ser 364}P 16.051 0.146 20.502
{cb ser 364}16.238 -1.168 19.763
{og ser 364}17.41 -1.925 20.054
@vectorlist {Hphobic} color= sea 
{ca ile 355}P 9.626 6.945 9.097
{cb ile 355}8.055 7.073 8.941
{cg1 ile 355}7.405 7.184 10.353
{cd1 ile 355}6.02 7.841 10.405
{cb ile 355}P 8.055 7.073 8.941
{cg2 ile 355}7.39 5.936 8.157
{ca phe 359}P 10.968 4.279 14.83
{cb phe 359}9.619 3.679 14.364
{cg phe 359}8.487 4.627 14.65
{cd1 phe 359}8.231 5.712 13.826
{ce1 phe 359}7.201 6.585 14.101
{cz phe 359}6.418 6.365 15.253
{cg phe 359}P 8.487 4.627 14.65
{cd2 phe 359}7.682 4.404 15.816
{ce2 phe 359}6.63 5.287 16.104
{cz phe 359}6.418 6.365 15.253
{ca leu 361}P 16.202 4.539 16.293
{cb leu 361}16.418 5.859 15.515
{cg leu 361}17.391 5.934 14.385
{cd1 leu 361}17.491 7.324 13.77
{cg leu 361}P 17.391 5.934 14.385
{cd2 leu 361}18.782 5.559 14.914
{ca leu 362}P 13.484 5.125 18.887
{cb leu 362}12.071 5.561 18.49
{cg leu 362}11.007 5.578 19.604
{cd1 leu 362}11.149 6.782 20.519
{cg leu 362}P 11.007 5.578 19.604
{cd2 leu 362}9.625 5.62 18.98
@labellist {Gly} color= sea 
{ G}P 13.083 6.691 12.807
{ G}P 17.983 3.047 21.622
@kinemage 2
@caption (B&T Fig. 2.7a)
Thioredoxin Calpha backbone, with the central, twisted beta sheet in pink.  (from PDB file 2TRX)
@zoom 0.9
@zslab 200
@center 20.167 37.478 26.951
@matrix <Fig. 2.7a>
-.071154 .036975 -.99678 .933398 .354837 -.053467 .351717 -.934197 -.059761
@2zoom 0.96
@2zslab 230
@2center 20.167 37.478 26.951
@2matrix <sheet face>
-.985226 .029887 -.168634 .165674 .415788 -.894244 .043389 -.908971 -.414596
@group {thioredoxin} 
@vectorlist {Calphas} color= white
{ca ser 1} P 9.382 32.527 24.427
{ca asp 2} 7.11 32.139 27.471
{ca lys 3} 10.143 32.018 29.811
{ca ile 4} 12.111 34.962 28.375
{ca ile 5} 12.027 38.44 29.972
{ca his 6} 11.783 41.302 27.424
{ca leu 7} 13.863 44.251 28.66
{ca thr 8} 13.814 47.943 27.774
{ca asp 9} 16.28 50.793 28.171
{ca asp 10} 14.725 51.49 31.621
{ca ser 11} 15.883 48.03 32.953
{ca phe 12} 19.393 49.232 33.506
{ca asp 13} 18.489 50.349 36.947
{ca thr 14} 15.955 47.514 37.6
{ca asp 15} 15.365 44.178 35.865
{ca val 16} 19.14 43.552 35.516
{ca leu 17} 21.151 45.828 37.785
{ca lys 18} 18.682 45.827 40.644
{ca ala 19} 17.785 42.334 39.562
{ca asp 20} 19.888 39.898 41.514
{ca gly 21} 20.759 36.386 40.383
{ca ala 22} 22.41 35.35 37.142
{ca ile 23} 20.818 36.806 34.011
{ca leu 24} 21.806 36.146 30.397
{ca val 25} 20.807 39.066 28.102
{ca asp 26} 20.583 38.656 24.317
{ca phe 27} 21.005 41.909 22.319
{ca trp 28} 19.285 41.313 18.95
{ca ala 29} 17.313 42.786 16.087
{ca glu 30} 14.864 41.297 13.586
{ca trp 31} 17.109 41.963 10.629
{ca cys 32} 19.956 39.881 12.161
{ca gly 33} 20.168 36.408 10.671
{ca pro 34} 22.392 34.814 13.325
{ca cys 35} 20.119 36.409 15.973
{ca lys 36} 17.182 34.396 14.66
{ca met 37} 19.253 31.197 14.593
{ca ile 38} 19.897 31.406 18.329
{ca ala 39} 16.349 32.19 19.469
{ca pro 40} 15.234 28.546 19.797
{ca ile 41} 18.433 27.721 21.655
{ca leu 42} 17.653 30.39 24.24
{ca asp 43} 14.167 28.938 24.734
{ca glu 44} 15.72 25.557 25.504
{ca ile 45} 18.27 27.035 27.945
{ca ala 46} 15.48 28.973 29.661
{ca asp 47} 13.686 25.633 30.209
{ca glu 48} 16.705 23.622 31.263
{ca tyr 49} 17.894 26.268 33.751
{ca gln 50} 14.598 27.537 35.223
{ca gly 51} 15.125 28.629 38.785
{ca lys 52} 18.881 28.971 38.273
{ca leu 53} 19.32 31.343 35.326
{ca thr 54} 16.99 34.018 33.821
{ca val 55} 17.144 34.606 30.037
{ca ala 56} 16.245 38.106 28.783
{ca lys 57} 16.21 39.853 25.43
{ca leu 58} 16.703 43.45 24.404
{ca asn 59} 15.766 44.545 20.861
{ca ile 60} 18.265 47.255 19.874
{ca asp 61} 15.943 48.797 17.216
{ca gln 62} 13.357 49.535 19.911
{ca asn 63} 15.789 50.308 22.737
{ca pro 64} 18.848 51.958 21.263
{ca gly 65} 20.245 53.466 24.453
{ca thr 66} 21.577 50.369 26.177
{ca ala 67} 24.038 48.749 23.711
{ca pro 68} 26.337 51.82 23.564
{ca lys 69} 26.712 51.75 27.394
{ca tyr 70} 28.385 48.369 27.068
{ca gly 71} 30.431 49.161 23.958
{ca ile 72} 28.414 46.621 21.949
{ca arg 73} 29.32 46.807 18.251
{ca gly 74} 27.794 43.618 16.74
{ca ile 75} 24.819 41.312 17.307
{ca pro 76} 23.922 38.971 18.636
{ca thr 77} 25.873 39.843 21.811
{ca leu 78} 25.169 37.909 25.021
{ca leu 79} 25.964 39.551 28.383
{ca leu 80} 25.972 37.4 31.531
{ca phe 81} 25.184 39.436 34.676
{ca lys 82} 25.906 38.257 38.218
{ca asn 83} 23.922 40.224 40.794
{ca gly 84} 23.739 43.277 38.526
{ca glu 85} 27.345 43.444 37.204
{ca val 86} 28.629 42.05 33.888
{ca ala 87} 30.558 38.837 34.47
{ca ala 88} 31.086 37.546 30.915
{ca thr 89} 30.248 38.414 27.319
{ca lys 90} 30.131 36.589 23.992
{ca val 91} 29.803 38.241 20.602
{ca gly 92} 28.231 36.229 17.756
{ca ala 93} 26.036 33.144 17.367
{ca leu 94} 26.925 29.808 18.959
{ca ser 95} 25.514 26.27 19.189
{ca lys 96} 23.563 24.888 22.146
{ca gly 97} 26.675 22.881 23.181
{ca gln 98} 28.858 25.982 23.051
{ca leu 99} 26.333 27.993 25.113
{ca lys 100} 26.312 25.258 27.775
{ca glu 101} 30.169 25.408 27.8
{ca phe 102} 30.034 29.208 28.114
{ca leu 103} 27.686 28.882 31.111
{ca asp 104} 29.717 26.116 32.783
{ca ala 105} 32.746 28.35 32.557
{ca asn 106} 31.005 31.138 34.466
{ca leu 107} 28.45 29.682 36.903
{ca ala 108} 28.548 27.541 40.012
@vectorlist {beta sheet} color= pink
{ca lys 3} P 10.143 32.018 29.811
{ca ile 4} 12.111 34.962 28.375
{ca ile 5} 12.027 38.44 29.972
{ca his 6} 11.783 41.302 27.424
{ca leu 7} 13.863 44.251 28.66
{ca gly 21} P 20.759 36.386 40.383
{ca ala 22} 22.41 35.35 37.142
{ca ile 23} 20.818 36.806 34.011
{ca leu 24} 21.806 36.146 30.397
{ca val 25} 20.807 39.066 28.102
{ca asp 26} 20.583 38.656 24.317
{ca phe 27} 21.005 41.909 22.319
{ca trp 28} 19.285 41.313 18.95
{ca ala 29} 17.313 42.786 16.087
{ca leu 53} P 19.32 31.343 35.326
{ca thr 54} 16.99 34.018 33.821
{ca val 55} 17.144 34.606 30.037
{ca ala 56} 16.245 38.106 28.783
{ca lys 57} 16.21 39.853 25.43
{ca leu 58} 16.703 43.45 24.404
{ca asn 59} 15.766 44.545 20.861
{ca ile 60} 18.265 47.255 19.874
{ca pro 76} P 23.922 38.971 18.636
{ca thr 77} 25.873 39.843 21.811
{ca leu 78} 25.169 37.909 25.021
{ca leu 79} 25.964 39.551 28.383
{ca leu 80} 25.972 37.4 31.531
{ca phe 81} 25.184 39.436 34.676
{ca lys 82} 25.906 38.257 38.218
{ca asn 83} 23.922 40.224 40.794
{ca glu 85} P 27.345 43.444 37.204
{ca val 86} 28.629 42.05 33.888
{ca ala 87} 30.558 38.837 34.47
{ca ala 88} 31.086 37.546 30.915
{ca thr 89} 30.248 38.414 27.319
{ca lys 90} 30.131 36.589 23.992
{ca val 91} 29.803 38.241 20.602
{ca gly 92} 28.231 36.229 17.756
@kinemage 3
@caption  (B&T Fig. 2.7b)
Hydrogen-bonding in the mixed beta sheet of thioredoxin.  Mainchain is white, with the beta strands numbered in sequence order.  Hbonding N and O atoms are marked in skyblue and red.  Beta-sheet Hbonds are in gold, and can be turned on and off according to whether they form parallel or antiparallel strand pairs.  (from PDB file 2TRX)
@onewidth
@zoom 1.07 
@zslab 130 
@center 20.807 39.066 28.102 
@matrix 
-.946461 0.069655 0.315214 0.193748 -0.658460 0.727251 0.258212 0.749386 0.609711 
@2zoom 1.07 
@2zslab 200 
@2center 20.807 39.066 28.102 
@2matrix 
-.116179 0.160395 -0.980192 -0.865540 -0.500411 0.020705 -0.487178 .850801 .196965
@group {thioredoxin} 
@subgroup {main ch} 
@vectorlist {beta str} color= white 
{ca lys 203} P 10.143 32.018 29.811
{c lys 203} 11.253 33.059 29.615
{o lys 203} 12.17 33.065 30.435
{c lys 203} P 11.253 33.059 29.615
{n ile 204} 11.123 33.874 28.621
{ca ile 204} 12.111 34.962 28.375
{c ile 204} 11.612 36.321 28.792
{o ile 204} 10.453 36.664 28.426
{c ile 204} P 11.612 36.321 28.792
{n ile 205} 12.367 37.081 29.554
{ca ile 205} 12.027 38.44 29.972
{c ile 205} 12.372 39.429 28.838
{o ile 205} 13.474 39.356 28.267
{c ile 205} P 12.372 39.429 28.838
{n his 206} 11.446 40.298 28.479
{ca his 206} 11.783 41.302 27.424
{c his 206} 12.112 42.569 28.198
{o his 206} 11.293 43.004 29.019
{c his 206} P 12.112 42.569 28.198
{n leu 207} 13.299 43.08 27.978
{ca leu 207} 13.863 44.251 28.66
{ca ala 222} P 22.41 35.35 37.142
{c ala 222} 21.386 35.532 36.005
{o ala 222} 20.373 34.831 35.948
{c ala 222} P 21.386 35.532 36.005
{n ile 223} 21.692 36.457 35.117
{ca ile 223} 20.818 36.806 34.011
{c ile 223} 21.646 36.846 32.701
{o ile 223} 22.654 37.554 32.713
{c ile 223} P 21.646 36.846 32.701
{n leu 224} 21.115 36.179 31.717
{ca leu 224} 21.806 36.146 30.397
{c leu 224} 20.983 37.061 29.486
{o leu 224} 19.775 36.732 29.37
{c leu 224} P 20.983 37.061 29.486
{n val 225} 21.557 38.1 28.931
{ca val 225} 20.807 39.066 28.102
{c val 225} 21.278 38.951 26.652
{o val 225} 22.478 39.078 26.394
{c val 225} P 21.278 38.951 26.652
{n asp 226} 20.299 38.712 25.786
{ca asp 226} 20.583 38.656 24.317
{c asp 226} 20.221 40.029 23.687
{o asp 226} 19.047 40.444 23.769
{c asp 226} P 20.221 40.029 23.687
{n phe 227} 21.251 40.662 23.125
{ca phe 227} 21.005 41.909 22.319
{c phe 227} 20.802 41.462 20.873
{o phe 227} 21.679 40.772 20.329
{c phe 227} P 20.802 41.462 20.873
{n trp 228} 19.649 41.814 20.28
{ca trp 228} 19.285 41.313 18.95
{ca leu 253} P 19.32 31.343 35.326
{c leu 253} 18.089 32.036 34.69
{o leu 253} 17.158 31.242 34.404
{c leu 253} P 18.089 32.036 34.69
{n thr 254} 18.119 33.343 34.531
{ca thr 254} 16.99 34.018 33.821
{c thr 254} 17.535 34.418 32.438
{o thr 254} 18.692 34.883 32.462
{c thr 254} P 17.535 34.418 32.438
{n val 255} 16.746 34.215 31.414
{ca val 255} 17.144 34.606 30.037
{c val 255} 16.289 35.822 29.669
{o val 255} 15.069 35.841 29.943
{c val 255} P 16.289 35.822 29.669
{n ala 256} 16.956 36.839 29.121
{ca ala 256} 16.245 38.106 28.783
{c ala 256} 16.736 38.546 27.389
{o ala 256} 17.818 38.144 26.92
{c ala 256} P 16.736 38.546 27.389
{n lys 257} 15.872 39.367 26.794
{ca lys 257} 16.21 39.853 25.43
{c lys 257} 16.015 41.366 25.387
{o lys 257} 15.099 41.898 26.04
{c lys 257} P 16.015 41.366 25.387
{n leu 258} 16.854 41.999 24.623
{ca leu 258} 16.703 43.45 24.404
{c leu 258} 16.832 43.673 22.881
{o leu 258} 17.874 43.365 22.309
{c leu 258} P 16.832 43.673 22.881
{n asn 259} 15.779 44.258 22.319
{ca asn 259} 15.766 44.545 20.861
{ca pro 276} P 23.922 38.971 18.636
{c pro 276} 25.113 39.144 19.588
{o pro 276} 26.186 38.661 19.233
{c pro 276} P 25.113 39.144 19.588
{n thr 277} 24.855 39.779 20.743
{ca thr 277} 25.873 39.843 21.811
{c thr 277} 25.12 39.326 23.062
{o thr 277} 23.992 39.764 23.272
{c thr 277} P 25.12 39.326 23.062
{n leu 278} 25.747 38.418 23.78
{ca leu 278} 25.169 37.909 25.021
{c leu 278} 25.971 38.495 26.177
{o leu 278} 27.22 38.403 26.099
{c leu 278} P 25.971 38.495 26.177
{n leu 279} 25.269 39.087 27.141
{ca leu 279} 25.964 39.551 28.383
{c leu 279} 25.498 38.653 29.508
{o leu 279} 24.252 38.402 29.605
{c leu 279} P 25.498 38.653 29.508
{n leu 280} 26.39 38.189 30.361
{ca leu 280} 25.972 37.4 31.531
{c leu 280} 26.189 38.325 32.761
{o leu 280} 27.332 38.797 32.954
{c leu 280} P 26.189 38.325 32.761
{n phe 281} 25.11 38.605 33.443
{ca phe 281} 25.184 39.436 34.676
{c phe 281} 25.136 38.514 35.912
{o phe 281} 24.44 37.501 35.875
{c phe 281} P 25.136 38.514 35.912
{n lys 282} 25.909 38.911 36.91
{ca lys 282} 25.906 38.257 38.218
{c ala 287} P 31.177 38.159 33.253
{n ala 288} 30.527 38.205 32.092
{ca ala 288} 31.086 37.546 30.915
{c ala 288} 30.307 38.051 29.696
{o ala 288} 29.161 38.499 29.857
{c ala 288} P 30.307 38.051 29.696
{n thr 289} 30.966 38.03 28.574
{ca thr 289} 30.248 38.414 27.319
{c thr 289} 30.682 37.453 26.221
{o thr 289} 31.742 36.835 26.251
{c thr 289} P 30.682 37.453 26.221
{n lys 290} 29.83 37.433 25.177
{ca lys 290} 30.131 36.589 23.992
{c lys 290} 29.539 37.273 22.785
{o lys 290} 28.31 37.532 22.788
{c lys 290} P 29.539 37.273 22.785
{n val 291} 30.354 37.59 21.807
{ca val 291} 29.803 38.241 20.602
{c val 291} 29.618 37.153 19.529
{o val 291} 30.585 36.382 19.295
{c val 291} P 29.618 37.153 19.529
{n gly 292} 28.466 37.16 18.9
{ca gly 292} 28.231 36.229 17.756
@subgroup {atom mks} dominant 
@vectorlist {N mks} color= sky 
{n ile b 5} P U 12.267 37.081 29.554
{} U 12.467 37.081 29.554
{} P U 12.367 36.981 29.554
{} U 12.367 37.181 29.554
{} P U 12.367 37.081 29.454
{} U 12.367 37.081 29.654
{n leu b 7} P U 13.199 43.08 27.978
{} U 13.399 43.08 27.978
{} P U 13.299 42.98 27.978
{} U 13.299 43.18 27.978
{} P U 13.299 43.08 27.878
{} U 13.299 43.08 28.078
{n ile b 23} P U 21.592 36.457 35.117
{} U 21.792 36.457 35.117
{} P U 21.692 36.357 35.117
{} U 21.692 36.557 35.117
{} P U 21.692 36.457 35.017
{} U 21.692 36.457 35.217
{n leu b 24} P U 21.015 36.179 31.717
{} U 21.215 36.179 31.717
{} P U 21.115 36.079 31.717
{} U 21.115 36.279 31.717
{} P U 21.115 36.179 31.617
{} U 21.115 36.179 31.817
{n val b 25} P U 21.457 38.1 28.931
{} U 21.657 38.1 28.931
{} P U 21.557 38. 28.931
{} U 21.557 38.2 28.931
{} P U 21.557 38.1 28.831
{} U 21.557 38.1 29.031
{n asp b 26} P U 20.199 38.712 25.786
{} U 20.399 38.712 25.786
{} P U 20.299 38.612 25.786
{} U 20.299 38.812 25.786
{} P U 20.299 38.712 25.686
{} U 20.299 38.712 25.886
{n phe b 27} P U 21.151 40.662 23.125
{} U 21.351 40.662 23.125
{} P U 21.251 40.562 23.125
{} U 21.251 40.762 23.125
{} P U 21.251 40.662 23.025
{} U 21.251 40.662 23.225
{n trp b 28} P U 19.549 41.814 20.28
{} U 19.749 41.814 20.28
{} P U 19.649 41.714 20.28
{} U 19.649 41.914 20.28
{} P U 19.649 41.814 20.18
{} U 19.649 41.814 20.38
{n thr b 54} P U 18.019 33.343 34.531
{} U 18.219 33.343 34.531
{} P U 18.119 33.243 34.531
{} U 18.119 33.443 34.531
{} P U 18.119 33.343 34.431
{} U 18.119 33.343 34.631
{n ala b 56} P U 16.856 36.839 29.121
{} U 17.056 36.839 29.121
{} P U 16.956 36.739 29.121
{} U 16.956 36.939 29.121
{} P U 16.956 36.839 29.021
{} U 16.956 36.839 29.221
{n lys b 57} P U 15.772 39.367 26.794
{} U 15.972 39.367 26.794
{} P U 15.872 39.267 26.794
{} U 15.872 39.467 26.794
{} P U 15.872 39.367 26.694
{} U 15.872 39.367 26.894
{n leu b 58} P U 16.754 41.999 24.623
{} U 16.954 41.999 24.623
{} P U 16.854 41.899 24.623
{} U 16.854 42.099 24.623
{} P U 16.854 41.999 24.523
{} U 16.854 41.999 24.723
{n thr b 77} P U 24.755 39.779 20.743
{} U 24.955 39.779 20.743
{} P U 24.855 39.679 20.743
{} U 24.855 39.879 20.743
{} P U 24.855 39.779 20.643
{} U 24.855 39.779 20.843
{n leu b 78} P U 25.647 38.418 23.78
{} U 25.847 38.418 23.78
{} P U 25.747 38.318 23.78
{} U 25.747 38.518 23.78
{} P U 25.747 38.418 23.68
{} U 25.747 38.418 23.88
{n leu b 79} P U 25.169 39.087 27.141
{} U 25.369 39.087 27.141
{} P U 25.269 38.987 27.141
{} U 25.269 39.187 27.141
{} P U 25.269 39.087 27.041
{} U 25.269 39.087 27.241
{n leu b 80} P U 26.29 38.189 30.361
{} U 26.49 38.189 30.361
{} P U 26.39 38.089 30.361
{} U 26.39 38.289 30.361
{} P U 26.39 38.189 30.261
{} U 26.39 38.189 30.461
{n phe b 81} P U 25.01 38.605 33.443
{} U 25.21 38.605 33.443
{} P U 25.11 38.505 33.443
{} U 25.11 38.705 33.443
{} P U 25.11 38.605 33.343
{} U 25.11 38.605 33.543
{n ala b 88} P U 30.427 38.205 32.092
{} U 30.627 38.205 32.092
{} P U 30.527 38.105 32.092
{} U 30.527 38.305 32.092
{} P U 30.527 38.205 31.992
{} U 30.527 38.205 32.192
{n lys b 90} P U 29.73 37.433 25.177
{} U 29.93 37.433 25.177
{} P U 29.83 37.333 25.177
{} U 29.83 37.533 25.177
{} P U 29.83 37.433 25.077
{} U 29.83 37.433 25.277
{n gly b 92} P U 28.366 37.16 18.9
{} U 28.566 37.16 18.9
{} P U 28.466 37.06 18.9
{} U 28.466 37.26 18.9
{} P U 28.466 37.16 18.8
{} U 28.466 37.16 19.
@vectorlist {O mks} color= red 
{o ile b 5} P U 13.374 39.356 28.267
{} U 13.574 39.356 28.267
{} P U 13.474 39.256 28.267
{} U 13.474 39.456 28.267
{} P U 13.474 39.356 28.167
{} U 13.474 39.356 28.367
{o ala b 22} P U 20.273 34.831 35.948
{} U 20.473 34.831 35.948
{} P U 20.373 34.731 35.948
{} U 20.373 34.931 35.948
{} P U 20.373 34.831 35.848
{} U 20.373 34.831 36.048
{o ile b 23} P U 22.554 37.554 32.713
{} U 22.754 37.554 32.713
{} P U 22.654 37.454 32.713
{} U 22.654 37.654 32.713
{} P U 22.654 37.554 32.613
{} U 22.654 37.554 32.813
{o leu b 24} P U 19.675 36.732 29.37
{} U 19.875 36.732 29.37
{} P U 19.775 36.632 29.37
{} U 19.775 36.832 29.37
{} P U 19.775 36.732 29.27
{} U 19.775 36.732 29.47
{o val b 25} P U 22.378 39.078 26.394
{} U 22.578 39.078 26.394
{} P U 22.478 38.978 26.394
{} U 22.478 39.178 26.394
{} P U 22.478 39.078 26.294
{} U 22.478 39.078 26.494
{o asp b 26} P U 18.947 40.444 23.769
{} U 19.147 40.444 23.769
{} P U 19.047 40.344 23.769
{} U 19.047 40.544 23.769
{} P U 19.047 40.444 23.669
{} U 19.047 40.444 23.869
{o phe b 27} P U 21.579 40.772 20.329
{} U 21.779 40.772 20.329
{} P U 21.679 40.672 20.329
{} U 21.679 40.872 20.329
{} P U 21.679 40.772 20.229
{} U 21.679 40.772 20.429
{o thr b 54} P U 18.592 34.883 32.462
{} U 18.792 34.883 32.462
{} P U 18.692 34.783 32.462
{} U 18.692 34.983 32.462
{} P U 18.692 34.883 32.362
{} U 18.692 34.883 32.562
{o val b 55} P U 14.969 35.841 29.943
{} U 15.169 35.841 29.943
{} P U 15.069 35.741 29.943
{} U 15.069 35.941 29.943
{} P U 15.069 35.841 29.843
{} U 15.069 35.841 30.043
{o ala b 56} P U 17.718 38.144 26.92
{} U 17.918 38.144 26.92
{} P U 17.818 38.044 26.92
{} U 17.818 38.244 26.92
{} P U 17.818 38.144 26.82
{} U 17.818 38.144 27.02
{o lys b 57} P U 14.999 41.898 26.04
{} U 15.199 41.898 26.04
{} P U 15.099 41.798 26.04
{} U 15.099 41.998 26.04
{} P U 15.099 41.898 25.94
{} U 15.099 41.898 26.14
{o leu b 58} P U 17.774 43.365 22.309
{} U 17.974 43.365 22.309
{} P U 17.874 43.265 22.309
{} U 17.874 43.465 22.309
{} P U 17.874 43.365 22.209
{} U 17.874 43.365 22.409
{o pro b 76} P U 26.086 38.661 19.233
{} U 26.286 38.661 19.233
{} P U 26.186 38.561 19.233
{} U 26.186 38.761 19.233
{} P U 26.186 38.661 19.133
{} U 26.186 38.661 19.333
{o thr b 77} P U 23.892 39.764 23.272
{} U 24.092 39.764 23.272
{} P U 23.992 39.664 23.272
{} U 23.992 39.864 23.272
{} P U 23.992 39.764 23.172
{} U 23.992 39.764 23.372
{o leu b 78} P U 27.12 38.403 26.099
{} U 27.32 38.403 26.099
{} P U 27.22 38.303 26.099
{} U 27.22 38.503 26.099
{} P U 27.22 38.403 25.999
{} U 27.22 38.403 26.199
{o leu b 79} P U 24.152 38.402 29.605
{} U 24.352 38.402 29.605
{} P U 24.252 38.302 29.605
{} U 24.252 38.502 29.605
{} P U 24.252 38.402 29.505
{} U 24.252 38.402 29.705
{o leu b 80} P U 27.232 38.797 32.954
{} U 27.432 38.797 32.954
{} P U 27.332 38.697 32.954
{} U 27.332 38.897 32.954
{} P U 27.332 38.797 32.854
{} U 27.332 38.797 33.054
{o phe b 81} P U 24.34 37.501 35.875
{} U 24.54 37.501 35.875
{} P U 24.44 37.401 35.875
{} U 24.44 37.601 35.875
{} P U 24.44 37.501 35.775
{} U 24.44 37.501 35.975
{o ala b 88} P U 29.061 38.499 29.857
{} U 29.261 38.499 29.857
{} P U 29.161 38.399 29.857
{} U 29.161 38.599 29.857
{} P U 29.161 38.499 29.757
{} U 29.161 38.499 29.957
{o lys b 90} P U 28.21 37.532 22.788
{} U 28.41 37.532 22.788
{} P U 28.31 37.432 22.788
{} U 28.31 37.632 22.788
{} P U 28.31 37.532 22.688
{} U 28.31 37.532 22.888
@subgroup {str label} dominant 
@labellist {b label} 
{b1} P 10.143 32.018 29.811
{b2} P 22.41 35.35 37.142
{b3} P 19.32 31.343 35.326
{b4} P 23.922 38.971 18.636
{b5} P 31.177 38.159 33.253
@subgroup {Hbonds} 
@vectorlist {parallel} color= gold 
{ile 205 hn} P 13.23 36.69 29.86
{val 255 o} U 14.52 36.1 29.92
{leu 207 hn} P 13.85 42.62 27.28
{lys 257 o} U 14.72 42.11 26.41
{leu 224 hn} P 20.25 35.71 31.88
{thr 254 o} U 19.16 35.13 32.29
{asp 226 hn} P 19.38 38.57 26.14
{ala 256 o} U 18.29 38.27 26.69
{trp 228 hn} P 19.02 42.43 20.75
{leu 258 o} U 18.22 43.09 21.84
{thr 254 hn} P 18.9 33.85 34.89
{ala 222 o} U 19.93 34.54 35.63
{ala 256 hn} P 17.93 36.73 28.94
{leu 224 o} U 19.22 36.73 29.24
{lys 257 hn} P 15.03 39.64 27.26
{ile 205 o} U 13.94 39.44 27.97
{leu 258 hn} P 17.59 41.48 24.2
{asp 226 o} U 18.61 40.75 23.9
@vectorlist {antipar} color= gold 
{ile 223 hn} P 22.57 36.94 35.21
{phe 281 o} U 23.88 37.33 35.68
{val 225 hn} P 22.54 38.22 29.09
{leu 279 o} U 23.74 38.35 29.45
{phe 227 hn} P 22.17 40.29 23.25
{thr 277 o} U 23.45 39.92 23.27
{thr 277 hn} P 23.96 40.21 20.88
{phe 227 o} U 22.36 40.6 20.49
{leu 278 hn} P 26.63 38.08 23.46
{lys 29 o} U 27.81 37.7 22.99
{leu 279 hn} P 24.28 39.21 27.01
{val 225 o} U 23.02 39.12 26.58
{leu 28 hn} P 27.36 38.38 30.2
{ala 288 o} U 28.62 38.46 29.96
{phe 281 hn} P 24.24 38.24 33.11
{ile 223 o} U 23.13 37.76 32.83
{ala 288 hn} P 29.66 38.69 32.03
{leu 28 o} U 28.03 38.77 32.68
{lys 29 hn} P 29. 37.99 25.21
{leu 278 o} U 27.75 38.28 25.83
{gly 292 hn} P 27.76 37.8 19.21
{pro 276 o} U 26.66 38.4 19.23
{asp 304 o} P U 30.9 27.45 34.58
@kinemage 4
@caption (B&T Fig. 2.9)
Ribonuclease A, part 1 - two different representations.  The all-atom image includes mainchain (white), sidechains (cyan), and hydrogens (skyblue - on only one half of the molecule); the mainchain-Hbond image includes mainchain (bluetint) and Hbonds (purple).  Click "ANIMATE" to cycle between them.  (from PDB file 7RSA)
@onewidth 
@zoom 1.13
@zslab 140
@center 30.254 16.583 12.164
@matrix
-.365643 -.556898 .745768 -.862319 -.098872 -.496619 .350302 -.824675 -.444072
@2zoom 1.13
@2zslab 130
@2center 30.254 16.583 12.164
@2matrix
-.800578 .111647 .588735 -.322623 -.908243 -.266474 .504964 -.403272 .763141
@3zoom 1.39
@3zslab 150
@3center 24.035 9.386 14.46
@3matrix
.177576 -.599576 .780369 -.749897 -.595944 -.287236 .637277 -.53419 -.555445
@group {RNAse all} animate
@vectorlist {main ch} color= white 
{n lys 1}P 17.208 26.496 -2.12
{ca lys 1}17.586 25.166 -1.492
{c lys 1}18.376 25.526 -0.224
{o lys 1}18.8 26.649 -0.055
{c lys 1}P 18.376 25.526 -0.224
{n glu 2}18.478 24.531 0.619
{ca glu 2}19.24 24.741 1.886
{c glu 2}20.671 25.2 1.614
{o glu 2}21.343 24.641 0.763
{c glu 2}P 20.671 25.2 1.614
{n thr 3}21.061 26.2 2.373
{ca thr 3}22.444 26.745 2.238
{c thr 3}23.424 25.749 2.981
{o thr 3}23.051 24.967 3.783
{c thr 3}P 23.424 25.749 2.981
{n ala 4}24.671 25.898 2.559
{ca ala 4}25.727 25.053 3.145
{c ala 4}25.832 25.387 4.647
{o ala 4}26.026 24.455 5.43
{c ala 4}P 25.832 25.387 4.647
{n ala 5}25.675 26.612 5.036
{ca ala 5}25.745 27.011 6.425
{c ala 5}24.64 26.34 7.232
{o ala 5}24.857 25.861 8.359
{c ala 5}P 24.64 26.34 7.232
{n ala 6}23.43 26.351 6.646
{ca ala 6}22.267 25.744 7.297
{c ala 6}22.43 24.247 7.39
{o ala 6}22.041 23.63 8.398
{c ala 6}P 22.43 24.247 7.39
{n lys 7}22.949 23.617 6.365
{ca lys 7}23.192 22.195 6.327
{c lys 7}24.177 21.845 7.463
{o lys 7}24.027 20.845 8.162
{c lys 7}P 24.177 21.845 7.463
{n phe 8}25.168 22.68 7.647
{ca phe 8}26.159 22.41 8.754
{c phe 8}25.464 22.381 10.086
{o phe 8}25.714 21.527 10.967
{c phe 8}P 25.464 22.381 10.086
{n glu 9}24.602 23.358 10.36
{ca glu 9}23.875 23.417 11.595
{c glu 9}23.035 22.159 11.803
{o glu 9}22.986 21.565 12.88
{c glu 9}P 23.035 22.159 11.803
{n arg 10}22.299 21.779 10.733
{ca arg 10}21.453 20.602 10.796
{c arg 10}22.214 19.305 11.033
{o arg 10}21.791 18.446 11.789
{c arg 10}P 22.214 19.305 11.033
{n gln 11}23.3 19.14 10.351
{ca gln 11}24.054 17.905 10.457
{c gln 11}24.923 17.82 11.712
{o gln 11}25.16 16.714 12.157
{c gln 11}P 24.923 17.82 11.712
{n his 12}25.409 18.956 12.227
{ca his 12}26.447 18.922 13.244
{c his 12}26.154 19.594 14.545
{o his 12}26.957 19.353 15.478
{c his 12}P 26.154 19.594 14.545
{n met 13}25.198 20.471 14.647
{ca met 13}25.04 21.192 15.911
{c met 13}24.002 20.607 16.833
{o met 13}22.889 20.356 16.395
{c met 13}P 24.002 20.607 16.833
{n asp 14}24.329 20.459 18.115
{ca asp 14}23.344 20.093 19.09
{c asp 14}23.661 20.886 20.395
{o asp 14}24.159 20.357 21.349
{c asp 14}P 23.661 20.886 20.395
{n ser 15}23.217 22.146 20.366
{ca ser 15}23.394 23.049 21.522
{c ser 15}22.425 22.746 22.643
{o ser 15}22.556 23.4 23.693
{c ser 15}P 22.425 22.746 22.643
{n ser 16}21.48 21.907 22.463
{ca ser 16}20.414 21.565 23.422
{c ser 16}20.848 20.573 24.447
{o ser 16}20.07 20.378 25.472
{c ser 16}P 20.848 20.573 24.447
{n thr 17}21.956 19.915 24.279
{ca thr 17}22.44 18.943 25.241
{c thr 17}23.936 19.195 25.423
{o thr 17}24.581 19.663 24.515
{c thr 17}P 23.936 19.195 25.423
{n ser 18}24.454 18.889 26.607
{ca ser 18}25.847 19.045 26.931
{c ser 18}26.737 17.889 26.47
{o ser 18}27.937 18.031 26.319
{c ser 18}P 26.737 17.889 26.47
{n ala 19}26.1 16.722 26.241
{ca ala 19}26.701 15.481 25.857
{c ala 19}25.535 14.465 25.582
{o ala 19}24.428 14.645 25.974
{c ala 19}P 25.535 14.465 25.582
{n ala 20}25.942 13.418 24.917
{ca ala 20}24.976 12.317 24.602
{c ala 20}24.598 11.643 25.979
{o ala 20}25.552 11.349 26.692
{c ala 20}P 24.598 11.643 25.979
{n ser 21}23.359 11.415 26.179
{ca ser 21}22.944 10.835 27.519
{c ser 21}22.68 9.342 27.564
{o ser 21}22.469 8.731 28.639
{c ser 21}P 22.68 9.342 27.564
{n ser 22}22.667 8.711 26.373
{ca ser 22}22.41 7.269 26.298
{c ser 22}22.956 6.712 24.988
{o ser 22}23.301 7.44 24.038
{c ser 22}P 22.956 6.712 24.988
{n ser 23}22.99 5.368 24.963
{ca ser 23}23.468 4.698 23.734
{c ser 23}22.562 4.97 22.549
{o ser 23}23.095 4.719 21.432
{c ser 23}P 22.562 4.97 22.549
{n asn 24}21.369 5.436 22.679
{ca asn 24}20.468 5.693 21.564
{c asn 24}20.598 7.095 20.931
{o asn 24}19.827 7.385 20.014
{c asn 24}P 20.598 7.095 20.931
{n tyr 25}21.447 7.907 21.507
{ca tyr 25}21.563 9.292 21.001
{c tyr 25}21.753 9.343 19.494
{o tyr 25}21.023 10.063 18.781
{c tyr 25}P 21.753 9.343 19.494
{n cys 26}22.752 8.646 19.021
{ca cys 26}23.058 8.67 17.576
{c cys 26}21.889 8.192 16.739
{o cys 26}21.477 8.79 15.724
{c cys 26}P 21.889 8.192 16.739
{n asn 27}21.3 7.068 17.159
{ca asn 27}20.13 6.544 16.382
{c asn 27}19.032 7.576 16.218
{o asn 27}18.458 7.741 15.143
{c asn 27}P 19.032 7.576 16.218
{n gln 28}18.703 8.227 17.343
{ca gln 28}17.648 9.227 17.412
{c gln 28}17.958 10.484 16.593
{o gln 28}17.132 10.925 15.764
{c gln 28}P 17.958 10.484 16.593
{n met 29}19.163 10.98 16.789
{ca met 29}19.577 12.206 16.105
{c met 29}19.845 12.085 14.635
{o met 29}19.525 12.986 13.822
{c met 29}P 19.845 12.085 14.635
{n met 30}20.424 10.999 14.205
{ca met 30}20.698 10.789 12.8
{c met 30}19.375 10.784 12.008
{o met 30}19.228 11.272 10.88
{c met 30}P 19.375 10.784 12.008
{n lys 31}18.365 10.17 12.664
{ca lys 31}17.038 10.097 12.03
{c lys 31}16.349 11.43 12.041
{o lys 31}15.815 11.89 11.003
{c lys 31}P 16.349 11.43 12.041
{n ser 32}16.295 12.097 13.232
{ca ser 32}15.601 13.378 13.388
{c ser 32}16.153 14.489 12.534
{o ser 32}15.342 15.388 12.086
{c ser 32}P 16.153 14.489 12.534
{n arg 33}17.436 14.475 12.29
{ca arg 33}18.079 15.473 11.443
{c arg 33}18.049 15.18 9.962
{o arg 33}18.66 15.859 9.155
{c arg 33}P 18.049 15.18 9.962
{n asn 34}17.347 14.083 9.616
{ca asn 34}17.176 13.714 8.174
{c asn 34}18.407 13.291 7.496
{o asn 34}18.577 13.381 6.252
{c asn 34}P 18.407 13.291 7.496
{n leu 35}19.317 12.71 8.312
{ca leu 35}20.608 12.205 7.775
{c leu 35}20.524 10.827 7.165
{o leu 35}21.457 10.485 6.382
{c leu 35}P 20.524 10.827 7.165
{n thr 36}19.469 10.148 7.46
{ca thr 36}19.27 8.753 6.966
{c thr 36}18.132 8.598 5.964
{o thr 36}17.629 7.482 5.787
{c thr 36}P 18.132 8.598 5.964
{n lys 37}17.763 9.73 5.392
{ca lys 37}16.571 9.74 4.494
{c lys 37}16.811 8.943 3.236
{o lys 37}15.866 8.117 2.9
{c lys 37}P 16.811 8.943 3.236
{n asp 38}17.873 9.175 2.575
{ca asp 38}18.201 8.519 1.294
{c asp 38}19.056 7.285 1.414
{o asp 38}18.973 6.355 0.561
{c asp 38}P 19.056 7.285 1.414
{n arg 39}19.889 7.279 2.457
{ca arg 39}20.841 6.198 2.738
{c arg 39}21.378 6.382 4.168
{o arg 39}21.212 7.431 4.737
{c arg 39}P 21.378 6.382 4.168
{n cys 40}21.98 5.353 4.694
{ca cys 40}22.59 5.535 6.039
{c cys 40}23.927 6.261 5.81
{o cys 40}24.831 5.695 5.19
{c cys 40}P 23.927 6.261 5.81
{n lys 41}24.013 7.43 6.345
{ca lys 41}25.338 8.178 6.328
{c lys 41}26.247 7.403 7.25
{o lys 41}25.814 7.129 8.415
{c lys 41}P 26.247 7.403 7.25
{n pro 42}27.41 6.971 6.934
{ca pro 42}28.249 6.149 7.703
{c pro 42}28.862 6.667 9.004
{o pro 42}29.057 5.895 9.971
{c pro 42}P 28.862 6.667 9.004
{n val 43}29.144 7.95 8.985
{ca val 43}29.768 8.615 10.125
{c val 43}29.222 10.041 10.234
{o val 43}28.971 10.659 9.2
{c val 43}P 29.222 10.041 10.234
{n asn 44}29.144 10.488 11.482
{ca asn 44}28.742 11.871 11.687
{c asn 44}29.223 12.309 13.102
{o asn 44}29.349 11.464 13.973
{c asn 44}P 29.223 12.309 13.102
{n thr 45}29.438 13.58 13.256
{ca thr 45}29.822 14.193 14.539
{c thr 45}28.821 15.312 14.881
{o thr 45}28.516 16.139 14.018
{c thr 45}P 28.821 15.312 14.881
{n phe 46}28.345 15.285 16.086
{ca phe 46}27.506 16.355 16.675
{c phe 46}28.386 17.153 17.714
{o phe 46}29.172 16.576 18.447
{c phe 46}P 28.386 17.153 17.714
{n val 47}28.186 18.468 17.696
{ca val 47}28.924 19.368 18.598
{c val 47}27.947 19.953 19.642
{o val 47}26.953 20.59 19.282
{c val 47}P 27.947 19.953 19.642
{n his 48}28.291 19.782 20.897
{ca his 48}27.462 20.244 22.
{c his 48}27.905 21.56 22.613
{o his 48}28.375 21.602 23.79
{c his 48}P 27.905 21.56 22.613
{n glu 49}27.902 22.567 21.819
{ca glu 49}28.365 23.897 22.126
{c glu 49}27.436 24.895 21.517
{o glu 49}26.593 24.617 20.653
{c glu 49}P 27.436 24.895 21.517
{n ser 50}27.571 26.133 21.97
{ca ser 50}26.764 27.227 21.378
{c ser 50}27.204 27.363 19.883
{o ser 50}28.355 27.163 19.508
{c ser 50}P 27.204 27.363 19.883
{n leu 51}26.228 27.763 19.066
{ca leu 51}26.507 28.033 17.651
{c leu 51}27.524 29.14 17.532
{o leu 51}28.428 29.075 16.695
{c leu 51}P 27.524 29.14 17.532
{n ala 52}27.433 30.204 18.332
{ca ala 52}28.432 31.269 18.291
{c ala 52}29.837 30.791 18.551
{o ala 52}30.783 31.242 17.852
{c ala 52}P 29.837 30.791 18.551
{n asp 53}30.064 29.883 19.507
{ca asp 53}31.347 29.343 19.79
{c asp 53}31.922 28.542 18.578
{o asp 53}33.118 28.556 18.399
{c asp 53}P 31.922 28.542 18.578
{n val 54}31.033 27.84 17.9
{ca val 54}31.485 27.069 16.731
{c val 54}31.761 28.015 15.533
{o val 54}32.75 27.796 14.839
{c val 54}P 31.761 28.015 15.533
{n gln 55}30.893 28.973 15.356
{ca gln 55}31.136 29.969 14.269
{c gln 55}32.444 30.689 14.462
{o gln 55}33.19 31.009 13.512
{c gln 55}P 32.444 30.689 14.462
{n ala 56}32.808 30.961 15.733
{ca ala 56}34.056 31.615 16.074
{c ala 56}35.326 30.895 15.651
{o ala 56}36.395 31.47 15.51
{c ala 56}P 35.326 30.895 15.651
{n val 57}35.231 29.556 15.437
{ca val 57}36.375 28.767 14.982
{c val 57}36.923 29.291 13.63
{o val 57}38.113 29.13 13.38
{c val 57}P 36.923 29.291 13.63
{n cys 58}36.056 29.892 12.859
{ca cys 58}36.46 30.466 11.561
{c cys 58}37.486 31.587 11.677
{o cys 58}38.068 31.993 10.649
{c cys 58}P 37.486 31.587 11.677
{n ser 59}37.684 32.059 12.843
{ca ser 59}38.691 33.121 13.147
{c ser 59}39.783 32.541 14.047
{o ser 59}40.562 33.362 14.656
{c ser 59}P 39.783 32.541 14.047
{n gln 60}39.971 31.272 14.131
{ca gln 60}40.942 30.596 14.995
{c gln 60}42.149 30.066 14.218
{o gln 60}42.587 30.826 13.279
{c gln 60}P 42.149 30.066 14.218
{n lys 61}42.688 28.956 14.474
{ca lys 61}43.934 28.481 13.811
{c lys 61}43.725 27.978 12.415
{o lys 61}43.12 26.929 12.277
{c lys 61}P 43.725 27.978 12.415
{n asn 62}44.271 28.645 11.445
{ca asn 62}44.181 28.19 10.053
{c asn 62}45.037 26.972 9.9
{o asn 62}46.221 26.889 10.344
{c asn 62}P 45.037 26.972 9.9
{n val 63}44.494 25.897 9.251
{ca val 63}45.102 24.621 9.008
{c val 63}44.563 24.044 7.672
{o val 63}43.508 24.412 7.164
{c val 63}P 44.563 24.044 7.672
{n ala 64}45.388 23.205 7.082
{ca ala 64}44.964 22.539 5.828
{c ala 64}43.908 21.503 6.231
{o ala 64}43.988 20.783 7.269
{c ala 64}P 43.908 21.503 6.231
{n cys 65}42.843 21.414 5.452
{ca cys 65}41.807 20.378 5.589
{c cys 65}42.471 19.028 5.164
{o cys 65}43.515 19.012 4.494
{c cys 65}P 42.471 19.028 5.164
{n lys 66}41.805 17.928 5.496
{ca lys 66}42.298 16.607 5.164
{c lys 66}42.539 16.465 3.649
{o lys 66}43.487 15.777 3.295
{c lys 66}P 42.539 16.465 3.649
{n asn 67}41.685 17.115 2.826
{ca asn 67}41.804 17.034 1.362
{c asn 67}42.782 18.037 0.746
{o asn 67}42.943 18.115 -0.517
{c asn 67}P 42.782 18.037 0.746
{n gly 68}43.43 18.832 1.596
{ca gly 68}44.403 19.789 1.119
{c gly 68}43.936 21.202 1.006
{o gly 68}44.775 22.12 0.898
{c gly 68}P 43.936 21.202 1.006
{n gln 69}42.633 21.426 1.047
{ca gln 69}42.153 22.846 0.966
{c gln 69}42.693 23.661 2.166
{o gln 69}42.932 23.082 3.225
{c gln 69}P 42.693 23.661 2.166
{n thr 70}42.818 24.944 1.999
{ca thr 70}43.368 25.782 3.031
{c thr 70}42.407 26.676 3.746
{o thr 70}42.827 27.606 4.458
{c thr 70}P 42.407 26.676 3.746
{n asn 71}41.115 26.396 3.635
{ca asn 71}40.058 27.129 4.337
{c asn 71}39.554 26.41 5.607
{o asn 71}38.428 26.663 5.978
{c asn 71}P 39.554 26.41 5.607
{n cys 72}40.418 25.575 6.191
{ca cys 72}40.05 24.898 7.409
{c cys 72}40.676 25.688 8.624
{o cys 72}41.674 26.414 8.452
{c cys 72}P 40.676 25.688 8.624
{n tyr 73}39.982 25.48 9.723
{ca tyr 73}40.319 26.124 10.998
{c tyr 73}40.142 25.152 12.141
{o tyr 73}39.126 24.457 12.193
{c tyr 73}P 40.142 25.152 12.141
{n gln 74}41.097 25.151 13.05
{ca gln 74}41.097 24.306 14.281
{c gln 74}40.777 25.152 15.504
{o gln 74}41.358 26.244 15.701
{c gln 74}P 40.777 25.152 15.504
{n ser 75}39.87 24.618 16.317
{ca ser 75}39.482 25.382 17.498
{c ser 75}40.687 25.418 18.488
{o ser 75}41.421 24.451 18.663
{c ser 75}P 40.687 25.418 18.488
{n tyr 76}40.761 26.572 19.147
{ca tyr 76}41.799 26.723 20.204
{c tyr 76}41.482 25.826 21.398
{o tyr 76}42.453 25.328 21.997
{c tyr 76}P 41.482 25.826 21.398
{n ser 77}40.255 25.667 21.735
{ca ser 77}39.785 24.858 22.852
{c ser 77}39.193 23.51 22.371
{o ser 77}38.747 23.411 21.27
{c ser 77}P 39.193 23.51 22.371
{n thr 78}39.153 22.605 23.311
{ca thr 78}38.469 21.287 23.086
{c thr 78}36.975 21.65 23.282
{o thr 78}36.521 22.583 23.955
{c thr 78}P 36.975 21.65 23.282
{n met 79}36.145 20.823 22.607
{ca met 79}34.698 20.95 22.639
{c met 79}34.049 19.628 22.95
{o met 79}34.683 18.617 22.643
{c met 79}P 34.049 19.628 22.95
{n ser 80}32.873 19.64 23.518
{ca ser 80}32.121 18.409 23.789
{c ser 80}31.486 17.946 22.435
{o ser 80}30.748 18.726 21.81
{c ser 80}P 31.486 17.946 22.435
{n ile 81}31.862 16.763 22.066
{ca ile 81}31.354 16.194 20.779
{c ile 81}30.84 14.77 21.012
{o ile 81}31.181 14.032 21.953
{c ile 81}P 30.84 14.77 21.012
{n thr 82}29.978 14.351 20.061
{ca thr 82}29.454 12.967 20.011
{c thr 82}29.835 12.406 18.601
{o thr 82}29.45 13.05 17.608
{c thr 82}P 29.835 12.406 18.601
{n asp 83}30.48 11.296 18.586
{ca asp 83}30.802 10.613 17.349
{c asp 83}29.774 9.502 17.129
{o asp 83}29.473 8.76 18.068
{c asp 83}P 29.774 9.502 17.129
{n cys 84}29.217 9.431 15.916
{ca cys 84}28.27 8.461 15.508
{c cys 84}28.879 7.609 14.399
{o cys 84}29.26 8.21 13.401
{c cys 84}P 28.879 7.609 14.399
{n arg 85}28.896 6.328 14.615
{ca arg 85}29.483 5.397 13.585
{c arg 85}28.514 4.24 13.352
{o arg 85}27.999 3.665 14.289
{c arg 85}P 28.514 4.24 13.352
{n glu 86}28.276 3.976 12.056
{ca glu 86}27.37 2.907 11.686
{c glu 86}27.879 1.545 12.21
{o glu 86}29.076 1.258 12.206
{c glu 86}P 27.879 1.545 12.21
{n thr 87}26.944 0.792 12.745
{ca thr 87}27.206 -0.55 13.332
{c thr 87}27.039 -1.594 12.228
{o thr 87}26.424 -1.364 11.188
{c thr 87}P 27.039 -1.594 12.228
{n gly 88}27.546 -2.806 12.587
{ca gly 88}27.478 -3.934 11.661
{c gly 88}26.085 -4.331 11.36
{o gly 88}25.864 -4.955 10.285
{c gly 88}P 26.085 -4.331 11.36
{n ser 89}25.104 -4.06 12.221
{ca ser 89}23.732 -4.382 12.046
{c ser 89}22.873 -3.33 11.295
{o ser 89}21.697 -3.545 11.036
{c ser 89}P 22.873 -3.33 11.295
{n ser 90}23.485 -2.252 10.959
{ca ser 90}22.792 -1.132 10.239
{c ser 90}22.34 -1.641 8.846
{o ser 90}23.204 -2.172 8.151
{c ser 90}P 22.34 -1.641 8.846
{n lys 91}21.099 -1.388 8.565
{ca lys 91}20.555 -1.79 7.259
{c lys 91}19.381 -0.873 6.878
{o lys 91}18.371 -0.88 7.509
{c lys 91}P 19.381 -0.873 6.878
{n tyr 92}19.657 -0.104 5.865
{ca tyr 92}18.656 0.896 5.387
{c tyr 92}17.278 0.236 5.168
{o tyr 92}17.3 -0.807 4.538
{c tyr 92}P 17.278 0.236 5.168
{n pro 93}16.213 0.874 5.626
{ca pro 93}16.084 2.138 6.263
{c pro 93}16.339 2.157 7.755
{o pro 93}16.241 3.235 8.341
{c pro 93}P 16.339 2.157 7.755
{n asn 94}16.685 0.996 8.27
{ca asn 94}16.942 0.899 9.749
{c asn 94}18.433 1.082 10.069
{o asn 94}19.147 0.161 10.391
{c asn 94}P 18.433 1.082 10.069
{n cys 95}18.822 2.35 9.914
{ca cys 95}20.23 2.728 10.122
{c cys 95}20.508 2.682 11.62
{o cys 95}19.671 3.17 12.395
{c cys 95}P 20.508 2.682 11.62
{n ala 96}21.644 2.122 11.943
{ca ala 96}22.021 1.934 13.355
{c ala 96}23.455 2.41 13.541
{o ala 96}24.309 2.193 12.744
{c ala 96}P 23.455 2.41 13.541
{n tyr 97}23.631 3.082 14.678
{ca tyr 97}24.868 3.697 15.059
{c tyr 97}25.367 3.447 16.497
{o tyr 97}24.502 3.294 17.403
{c tyr 97}P 25.367 3.447 16.497
{n lys 98}26.647 3.47 16.601
{ca lys 98}27.288 3.45 17.931
{c lys 98}27.562 4.972 18.293
{o lys 98}28.094 5.681 17.451
{c lys 98}P 27.562 4.972 18.293
{n thr 99}27.219 5.287 19.526
{ca thr 99}27.414 6.613 20.086
{c thr 99}28.7 6.627 20.975
{o thr 99}28.785 5.791 21.926
{c thr 99}P 28.7 6.627 20.975
{n thr 100}29.572 7.552 20.753
{ca thr 100}30.804 7.723 21.52
{c thr 100}30.918 9.187 21.92
{o thr 100}30.87 10.069 21.054
{c thr 100}P 30.918 9.187 21.92
{n gln 101}31.12 9.423 23.186
{ca gln 101}31.314 10.813 23.712
{c gln 101}32.798 11.146 23.701
{o gln 101}33.655 10.256 24.03
{c gln 101}P 32.798 11.146 23.701
{n ala 102}33.139 12.391 23.403
{ca ala 102}34.56 12.789 23.426
{c ala 102}34.615 14.278 23.683
{o ala 102}33.664 15.016 23.596
{c ala 102}P 34.615 14.278 23.683
{n asn 103}35.833 14.709 23.98
{ca asn 103}36.138 16.172 24.199
{c asn 103}37.386 16.417 23.348
{o asn 103}38.449 15.966 23.775
{c asn 103}P 37.386 16.417 23.348
{n lys 104}37.262 17.074 22.249
{ca lys 104}38.356 17.236 21.307
{c lys 104}38.295 18.577 20.639
{o lys 104}37.276 19.238 20.681
{c lys 104}P 38.295 18.577 20.639
{n his 105}39.389 18.914 19.955
{ca his 105}39.408 20.143 19.191
{c his 105}38.673 19.746 17.89
{o his 105}38.758 18.608 17.473
{c his 105}P 38.673 19.746 17.89
{n ile 106}38.04 20.722 17.28
{ca ile 106}37.336 20.475 16.023
{c ile 106}38.065 21.263 14.886
{o ile 106}38.64 22.299 15.13
{c ile 106}P 38.065 21.263 14.886
{n ile 107}37.932 20.702 13.701
{ca ile 107}38.447 21.312 12.498
{c ile 107}37.225 21.458 11.526
{o ile 107}36.629 20.427 11.159
{c ile 107}P 37.225 21.458 11.526
{n val 108}36.986 22.675 11.122
{ca val 108}35.904 22.994 10.148
{c val 108}36.445 23.781 8.947
{o val 108}37.411 24.483 9.096
{c val 108}P 36.445 23.781 8.947
{n ala 109}35.716 23.657 7.84
{ca ala 109}35.991 24.45 6.631
{c ala 109}34.957 25.619 6.693
{o ala 109}33.82 25.402 7.029
{c ala 109}P 34.957 25.619 6.693
{n cys 110}35.449 26.834 6.361
{ca cys 110}34.641 28.025 6.403
{c cys 110}34.521 28.686 5.026
{o cys 110}35.477 28.649 4.248
{c cys 110}P 34.521 28.686 5.026
{n glu 111}33.367 29.308 4.822
{ca glu 111}33.165 30.049 3.541
{c glu 111}32.134 31.166 3.768
{o glu 111}31.371 31.069 4.676
{c glu 111}P 32.134 31.166 3.768
{n gly 112}32.149 32.095 2.803
{ca gly 112}31.175 33.138 2.666
{c gly 112}31.359 34.387 3.46
{o gly 112}32.36 34.628 4.064
{c gly 112}P 31.359 34.387 3.46
{n asn 113}30.301 35.233 3.36
{ca asn 113}30.28 36.487 4.124
{c asn 113}28.855 36.591 4.716
{o asn 113}27.912 36.738 3.868
{c asn 113}P 28.855 36.591 4.716
{n pro 114}28.647 36.467 6.026
{ca pro 114}29.614 36.247 7.061
{c pro 114}30.338 34.86 6.807
{o pro 114}29.769 33.925 6.192
{c pro 114}P 30.338 34.86 6.807
{n tyr 115}31.523 34.826 7.3
{ca tyr 115}32.421 33.646 7.152
{c tyr 115}32.095 32.631 8.196
{o tyr 115}32.476 32.866 9.344
{c tyr 115}P 32.095 32.631 8.196
{n val 116}31.457 31.559 7.768
{ca val 116}30.956 30.562 8.72
{c val 116}31.33 29.154 8.309
{o val 116}31.677 28.881 7.183
{c val 116}P 31.33 29.154 8.309
{n pro 117}31.178 28.232 9.269
{ca pro 117}31.468 26.825 8.989
{c pro 117}30.416 26.23 8.034
{o pro 117}29.225 26.381 8.186
{c pro 117}P 30.416 26.23 8.034
{n val 118}30.984 25.51 7.067
{ca val 118}30.199 24.806 6.062
{c val 118}30.47 23.318 5.991
{o val 118}29.741 22.57 5.33
{c val 118}P 30.47 23.318 5.991
{n his 119}31.559 22.833 6.615
{ca his 119}31.921 21.422 6.588
{c his 119}32.648 21.104 7.883
{o his 119}33.454 21.868 8.347
{c his 119}P 32.648 21.104 7.883
{n phe 120}32.411 19.929 8.356
{ca phe 120}33.115 19.358 9.579
{c phe 120}34.188 18.483 9.001
{o phe 120}33.898 17.433 8.363
{c phe 120}P 34.188 18.483 9.001
{n asp 121}35.456 18.826 9.257
{ca asp 121}36.574 18.085 8.688
{c asp 121}37.052 16.994 9.556
{o asp 121}37.267 15.882 9.087
{c asp 121}P 37.052 16.994 9.556
{n ala 122}37.258 17.213 10.841
{ca ala 122}37.795 16.256 11.776
{c ala 122}37.751 16.751 13.219
{o ala 122}37.542 17.927 13.504
{c ala 122}P 37.751 16.751 13.219
{n ser 123}37.991 15.807 14.114
{ca ser 123}38.148 16.103 15.564
{c ser 123}39.579 15.566 15.888
{o ser 123}39.948 14.45 15.404
{c ser 123}P 39.579 15.566 15.888
{n val 124}40.342 16.34 16.587
{ca val 124}41.74 15.965 16.948
{c val 124}41.922 16.191 18.44
{o val 124}42.843 15.448 18.971
{c val 124}P 41.922 16.191 18.44
{oxt val 124}41.303 16.985 19.124
@vectorlist {side ch} color=cyan
{ca lys 1}P 17.586 25.166 -1.492
{cb lys 1}18.268 24.389 -2.543
{cg lys 1}19.133 23.202 -2.442
{cd lys 1}19.271 22.45 -3.786
{ce lys 1}19.911 21.079 -3.701
{nz lys 1}19.031 19.957 -3.304
{ca glu 2}P 19.24 24.741 1.886
{cb glu 2}19.271 23.414 2.58
{cg glu 2}19.819 23.454 4.018
{cd glu 2}19.847 22.078 4.598
{oe1 glu 2}20.055 21.073 3.945
{cd glu 2}P 19.847 22.078 4.598
{oe2 glu 2}19.644 21.974 5.883
{ca thr 3}P 22.444 26.745 2.238
{cb thr 3}22.587 28.143 2.78
{og1 thr 3}22.446 28.038 4.208
{cb thr 3}P 22.587 28.143 2.78
{cg2 thr 3}21.61 29.18 2.206
{ca ala 4}P 25.727 25.053 3.145
{cb ala 4}27.039 25.21 2.351
{ca ala 5}P 25.745 27.011 6.425
{cb ala 5}25.718 28.509 6.655
{ca ala 6}P 22.267 25.744 7.297
{cb ala 6}20.999 26.091 6.497
{ca lys 7}P 23.192 22.195 6.327
{cb lys 7}23.679 21.746 4.982
{cg lys 7}23.978 20.234 4.899
{cd lys 7}24.475 19.912 3.518
{ce lys 7}25.099 18.518 3.446
{nz lys 7}25.594 18.329 2.055
{ca phe 8}P 26.159 22.41 8.754
{cb phe 8}27.312 23.42 8.668
{cg phe 8}28.302 23.279 9.803
{cd1 phe 8}29.447 22.502 9.644
{ce1 phe 8}30.352 22.303 10.68
{cz phe 8}30.054 22.863 11.907
{cg phe 8}P 28.302 23.279 9.803
{cd2 phe 8}28.07 23.866 11.044
{ce2 phe 8}28.932 23.669 12.111
{cz phe 8}30.054 22.863 11.907
{ca glu 9}P 23.875 23.417 11.595
{cb glu 9}22.98 24.601 11.795
{cg glu 9}23.673 25.913 11.79
{cd glu 9}22.824 27.157 12.014
{oe1 glu 9}23.294 28.213 11.509
{cd glu 9}P 22.824 27.157 12.014
{oe2 glu 9}21.777 26.903 12.766
{ca arg 10}P 21.453 20.602 10.796
{cb arg 10}20.582 20.491 9.498
{cg arg 10}19.641 19.279 9.461
{cd arg 10}18.701 19.356 8.28
{ne arg 10}19.389 19.406 7.002
{cz arg 10}19.81 18.395 6.314
{nh1 arg 10}19.731 17.119 6.766
{cz arg 10}P 19.81 18.395 6.314
{nh2 arg 10}20.426 18.535 5.177
{ca gln 11}P 24.054 17.905 10.457
{cb agln 11}24.97 17.7 9.254
{cg agln 11}24.342 17.651 7.912
{cd agln 11}25.335 17.148 6.845
{oe1agln 11}26.486 17.453 6.879
{cd agln 11}P 25.335 17.148 6.845
{ne2agln 11}24.756 16.369 5.95
{ca his 12}P 26.447 18.922 13.244
{cb his 12}27.78 19.415 12.673
{cg his 12}28.264 18.701 11.439
{nd1 his 12}28.652 17.372 11.529
{ce1 his 12}28.956 17.017 10.277
{ne2 his 12}28.813 18.031 9.434
{cg his 12}P 28.264 18.701 11.439
{cd2 his 12}28.363 19.107 10.149
{ne2 his 12}28.813 18.031 9.434
{ca met 13}P 25.04 21.192 15.911
{cb met 13}24.702 22.681 15.611
{cg met 13}25.801 23.508 14.991
{sd met 13}27.322 23.593 15.972
{ce met 13}26.645 24.213 17.547
{ca asp 14}P 23.344 20.093 19.09
{cb asp 14}23.181 18.611 19.347
{cg asp 14}22.012 18.416 20.335
{od1 asp 14}21.225 19.303 20.581
{cg asp 14}P 22.012 18.416 20.335
{od2 asp 14}22.005 17.225 20.835
{ca ser 15}P 23.394 23.049 21.522
{cb ser 15}23.177 24.506 21.046
{og ser 15}24.033 24.786 19.955
{ca ser 16}P 20.414 21.565 23.422
{cb ser 16}19.12 21.051 22.741
{og ser 16}19.236 19.605 22.43
{ca thr 17}P 22.44 18.943 25.241
{cb thr 17}22.158 17.462 24.884
{og1 thr 17}22.94 17.153 23.716
{cb thr 17}P 22.158 17.462 24.884
{cg2 thr 17}20.725 17.237 24.517
{ca ser 18}P 25.847 19.045 26.931
{cb ser 18}26.108 19.259 28.453
{og ser 18}25.582 20.584 28.656
{ca ala 19}P 26.701 15.481 25.857
{cb ala 19}27.629 14.92 26.934
{ca ala 20}P 24.976 12.317 24.602
{cb ala 20}25.733 11.346 23.729
{ca ser 21}P 22.944 10.835 27.519
{cb ser 21}21.652 11.587 27.901
{og ser 21}20.696 11.571 26.829
{ca ser 22}P 22.41 7.269 26.298
{cb ser 22}20.935 6.928 26.406
{og ser 22}20.278 7.097 25.168
{ca ser 23}P 23.468 4.698 23.734
{cb ser 23}23.621 3.188 23.974
{og ser 23}22.413 2.696 24.277
{ca asn 24}P 20.468 5.693 21.564
{cb asn 24}19.009 5.364 21.857
{cg asn 24}18.802 3.84 21.651
{od1 asn 24}18.96 3.352 20.508
{cg asn 24}P 18.802 3.84 21.651
{nd2 asn 24}18.474 3.167 22.703
{ca tyr 25}P 21.563 9.292 21.001
{cb tyr 25}22.66 10.039 21.79
{cg tyr 25}22.883 11.445 21.303
{cd1 tyr 25}22.139 12.521 21.821
{ce1 tyr 25}22.355 13.834 21.335
{cz tyr 25}23.247 14.02 20.299
{oh tyr 25}23.459 15.292 19.765
{cg tyr 25}P 22.883 11.445 21.303
{cd2 tyr 25}23.772 11.705 20.248
{ce2 tyr 25}23.969 13. 19.762
{cz tyr 25}23.247 14.02 20.299
{ca cys 26}P 23.058 8.67 17.576
{cb cys 26}24.326 7.963 17.205
{sg cys 26}25.791 8.872 17.75
{ca asn 27}P 20.13 6.544 16.382
{cb asn 27}19.597 5.281 17.048
{cg asn 27}20.553 4.103 16.816
{od1 asn 27}21.388 4.078 15.966
{cg asn 27}P 20.553 4.103 16.816
{nd2 asn 27}20.4 3.139 17.728
{ca gln 28}P 17.648 9.227 17.412
{cb gln 28}17.368 9.617 18.876
{cg gln 28}16.895 8.466 19.725
{cd gln 28}17.048 8.675 21.21
{oe1 gln 28}17.787 9.537 21.759
{cd gln 28}P 17.048 8.675 21.21
{ne2 gln 28}16.321 7.823 22.004
{ca met 29}P 19.577 12.206 16.105
{cb met 29}20.8 12.797 16.793
{cg met 29}20.503 13.307 18.136
{sd met 29}19.43 14.734 18.21
{ce met 29}20.422 15.98 17.5
{ca met 30}P 20.698 10.789 12.8
{cb met 30}21.484 9.51 12.617
{cg met 30}22.92 9.584 13.114
{sd met 30}23.991 10.74 12.258
{ce met 30}24.332 9.969 10.688
{ca lys 31}P 17.038 10.097 12.03
{cb lys 31}16.166 9.049 12.723
{cg lys 31}14.987 8.781 11.758
{cd lys 31}14.017 7.764 12.258
{ce lys 31}12.966 7.502 11.131
{nz lys 31}11.61 7.822 11.651
{ca ser 32}P 15.601 13.378 13.388
{cb aser 32}15.404 13.816 14.849
{og aser 32}16.64 14.208 15.316
{ca arg 33}P 18.079 15.473 11.443
{cb arg 33}19.472 15.735 11.997
{cg arg 33}19.534 16.325 13.407
{cd arg 33}18.953 17.691 13.482
{ne arg 33}19.055 18.307 14.784
{cz arg 33}20.166 18.916 15.251
{nh1 arg 33}21.191 19.136 14.483
{cz arg 33}P 20.166 18.916 15.251
{nh2 arg 33}20.15 19.36 16.504
{ca asn 34}P 17.176 13.714 8.174
{cb aasn 34}16.416 14.887 7.517
{cg aasn 34}15.451 14.516 6.431
{od1aasn 34}14.721 13.53 6.603
{cg aasn 34}P 15.451 14.516 6.431
{nd2aasn 34}15.433 15.316 5.374
{ca leu 35}P 20.608 12.205 7.775
{cb leu 35}21.725 12.353 8.816
{cg leu 35}21.804 13.814 9.368
{cd1 leu 35}22.855 13.879 10.436
{cg leu 35}P 21.804 13.814 9.368
{cd2 leu 35}21.953 14.886 8.349
{ca thr 36}P 19.27 8.753 6.966
{cb thr 36}19.028 7.886 8.215
{og1 thr 36}17.832 8.105 8.839
{cb thr 36}P 19.028 7.886 8.215
{cg2 thr 36}20.21 8.003 9.191
{ca lys 37}P 16.571 9.74 4.494
{cb lys 37}16.168 11.204 4.251
{cg lys 37}14.965 11.336 3.312
{cd lys 37}14.567 12.78 3.075
{ce lys 37}15.523 13.564 2.203
{nz lys 37}15.099 13.438 0.76
{ca asp 38}P 18.201 8.519 1.294
{cb asp 38}18.834 9.419 0.304
{cg asp 38}17.935 10.564 -0.104
{od1 asp 38}18.453 11.703 -0.053
{cg asp 38}P 17.935 10.564 -0.104
{od2 asp 38}16.681 10.289 -0.421
{ca arg 39}P 20.841 6.198 2.738
{cb arg 39}22.036 6.323 1.747
{cg arg 39}22.82 7.63 1.934
{cd arg 39}23.627 8.111 0.806
{ne arg 39}24.574 9.166 1.261
{cz arg 39}25.744 8.97 1.875
{nh1 arg 39}26.189 7.78 2.276
{cz arg 39}P 25.744 8.97 1.875
{nh2 arg 39}26.545 10.033 2.061
{ca cys 40}P 22.59 5.535 6.039
{cb cys 40}22.819 4.207 6.711
{sg cys 40}21.387 3.103 6.806
{ca lys 41}P 25.338 8.178 6.328
{cb lys 41}25.033 9.562 6.884
{cg lys 41}26.197 10.481 6.907
{cd lys 41}26.024 11.91 7.416
{ce lys 41}27.199 12.781 6.952
{nz lys 41}27.808 13.648 7.984
{ca pro 42}P 28.249 6.149 7.703
{cb pro 42}29.334 5.604 6.788
{cg pro 42}29.423 6.646 5.714
{cd pro 42}28.016 7.142 5.532
{n pro 42}P 27.41 6.971 6.934
{cd pro 42}28.016 7.142 5.532
{ca val 43}P 29.768 8.615 10.125
{cb aval 43}31.307 8.774 9.974
{cg1aval 43}32.004 9.181 11.296
{cb aval 43}P 31.307 8.774 9.974
{cg2aval 43}32.047 7.659 9.29
{ca asn 44}P 28.742 11.871 11.687
{cb asn 44}27.269 12.059 11.453
{cg asn 44}26.865 13.523 11.383
{od1 asn 44}27.475 14.261 10.595
{cg asn 44}P 26.865 13.523 11.383
{nd2 asn 44}25.953 13.986 12.242
{ca thr 45}P 29.822 14.193 14.539
{cb thr 45}31.234 14.824 14.507
{og1 thr 45}32.123 13.793 14.091
{cb thr 45}P 31.234 14.824 14.507
{cg2 thr 45}31.706 15.349 15.862
{ca phe 46}P 27.506 16.355 16.675
{cb phe 46}26.255 15.832 17.366
{cg phe 46}25.273 15.268 16.363
{cd1 phe 46}24.411 16.118 15.698
{ce1 phe 46}23.518 15.587 14.733
{cz phe 46}23.469 14.218 14.549
{cg phe 46}P 25.273 15.268 16.363
{cd2 phe 46}25.229 13.916 16.143
{ce2 phe 46}24.316 13.347 15.269
{cz phe 46}23.469 14.218 14.549
{ca val 47}P 28.924 19.368 18.598
{cb val 47}29.664 20.411 17.799
{cg1 val 47}30.491 21.369 18.681
{cb val 47}P 29.664 20.411 17.799
{cg2 val 47}30.479 19.841 16.631
{ca his 48}P 27.462 20.244 22.
{cb his 48}27.42 19.144 23.067
{cg his 48}26.946 17.81 22.592
{nd1 his 48}25.643 17.561 22.425
{ce1 his 48}25.579 16.284 22.004
{ne2 his 48}26.781 15.748 21.899
{cg his 48}P 26.946 17.81 22.592
{cd2 his 48}27.677 16.689 22.314
{ne2 his 48}26.781 15.748 21.899
{ca glu 49}P 28.365 23.897 22.126
{cb glu 49}29.794 24.12 21.553
{cg glu 49}30.883 23.178 22.072
{cd glu 49}31.266 23.209 23.539
{oe1 glu 49}31.867 22.302 24.089
{cd glu 49}P 31.266 23.209 23.539
{oe2 glu 49}30.856 24.274 24.182
{ca ser 50}P 26.764 27.227 21.378
{cb aser 50}26.905 28.559 22.129
{og aser 50}28.151 29.063 21.898
{ca leu 51}P 26.507 28.033 17.651
{cb leu 51}25.223 28.335 16.86
{cg leu 51}25.386 28.635 15.392
{cd1 leu 51}25.93 27.485 14.614
{cg leu 51}P 25.386 28.635 15.392
{cd2 leu 51}24.067 29.101 14.795
{ca ala 52}P 28.432 31.269 18.291
{cb ala 52}28.032 32.379 19.26
{ca asp 53}P 31.347 29.343 19.79
{cb asp 53}31.458 28.519 21.059
{cg asp 53}31.366 29.34 22.322
{od1 asp 53}31.507 30.549 22.326
{cg asp 53}P 31.366 29.34 22.322
{od2 asp 53}31.185 28.695 23.391
{ca val 54}P 31.485 27.069 16.731
{cb val 54}30.538 25.912 16.398
{cg1 val 54}30.859 25.214 15.077
{cb val 54}P 30.538 25.912 16.398
{cg2 val 54}30.464 24.927 17.558
{ca gln 55}P 31.136 29.969 14.269
{cb gln 55}30.013 30.978 14.176
{cg gln 55}28.721 30.385 13.647
{cd gln 55}27.553 31.357 13.836
{oe1 gln 55}27.493 32.22 14.712
{cd gln 55}P 27.553 31.357 13.836
{ne2 gln 55}26.598 31.146 13.024
{ca ala 56}P 34.056 31.615 16.074
{cb ala 56}34.15 31.899 17.584
{ca val 57}P 36.375 28.767 14.982
{cb val 57}36.038 27.269 15.023
{cg1 val 57}37.162 26.4 14.476
{cb val 57}P 36.038 27.269 15.023
{cg2 val 57}35.669 26.824 16.384
{ca cys 58}P 36.46 30.466 11.561
{cb cys 58}35.26 30.882 10.715
{sg cys 58}34.23 29.527 10.215
{ca ser 59}P 38.691 33.121 13.147
{cb ser 59}37.976 34.327 13.771
{og ser 59}37.556 33.973 15.075
{ca gln 60}P 40.942 30.596 14.995
{cb gln 60}40.266 29.685 15.983
{cg gln 60}39.365 30.497 16.889
{cd gln 60}38.622 29.667 17.9
{oe1 gln 60}38.886 28.52 18.186
{cd gln 60}P 38.622 29.667 17.9
{ne2 gln 60}37.596 30.287 18.42
{ca lys 61}P 43.934 28.481 13.811
{cb alys 61}44.56 27.407 14.692
{cg alys 61}45.981 26.971 14.334
{cd alys 61}46.619 26.06 15.372
{ce alys 61}48.139 26.162 15.397
{nz alys 61}48.781 25.606 16.615
{ca asn 62}P 44.181 28.19 10.053
{cb asn 62}44.462 29.337 9.065
{cg asn 62}44.416 28.893 7.6
{od1 asn 62}45.435 28.921 6.87
{cg asn 62}P 44.416 28.893 7.6
{nd2 asn 62}43.267 28.41 7.11
{ca val 63}P 45.102 24.621 9.008
{cb val 63}44.948 23.633 10.169
{cg1 val 63}45.476 24.186 11.482
{cb val 63}P 44.948 23.633 10.169
{cg2 val 63}43.548 23.139 10.416
{ca ala 64}P 44.964 22.539 5.828
{cb ala 64}46.113 21.978 5.023
{ca cys 65}P 41.807 20.378 5.589
{cb cys 65}40.654 20.633 4.615
{sg cys 65}39.937 22.3 4.744
{ca lys 66}P 42.298 16.607 5.164
{cb lys 66}41.383 15.444 5.49
{cg lys 66}41.242 15.203 6.976
{cd lys 66}40.125 14.09 7.169
{ce lys 66}40.085 13.618 8.591
{nz lys 66}38.666 13.241 9.018
{ca asn 67}P 41.804 17.034 1.362
{cb aasn 67}40.424 17.182 0.717
{cg aasn 67}39.923 18.632 0.639
{od1aasn 67}40.325 19.587 1.347
{cg aasn 67}P 39.923 18.632 0.639
{nd2aasn 67}39.041 18.87 -0.362
{ca gln 69}P 42.153 22.846 0.966
{cb gln 69}40.629 22.899 1.04
{cg gln 69}39.954 22.42 -0.175
{cd gln 69}38.438 22.369 -0.019
{oe1 gln 69}37.885 21.511 -0.732
{cd gln 69}P 38.438 22.369 -0.019
{ne2 gln 69}37.749 23.089 0.915
{ca thr 70}P 43.368 25.782 3.031
{cb thr 70}44.598 26.477 2.427
{og1 thr 70}44.175 27.192 1.308
{cb thr 70}P 44.598 26.477 2.427
{cg2 thr 70}45.753 25.579 2.056
{ca asn 71}P 40.058 27.129 4.337
{cb asn 71}38.939 27.564 3.388
{cg asn 71}38.169 26.409 2.824
{od1 asn 71}38.746 25.363 2.496
{cg asn 71}P 38.169 26.409 2.824
{nd2 asn 71}36.845 26.568 2.742
{ca cys 72}P 40.05 24.898 7.409
{cb cys 72}40.448 23.495 7.421
{sg cys 72}39.251 22.332 6.591
{ca tyr 73}P 40.319 26.124 10.998
{cb tyr 73}39.489 27.392 11.283
{cg tyr 73}39.746 28.438 10.23
{cd1 tyr 73}40.709 29.432 10.448
{ce1 tyr 73}40.965 30.356 9.418
{cz tyr 73}40.312 30.244 8.212
{oh tyr 73}40.507 31.152 7.162
{cg tyr 73}P 39.746 28.438 10.23
{cd2 tyr 73}39.055 28.409 9.028
{ce2 tyr 73}39.335 29.286 7.987
{cz tyr 73}40.312 30.244 8.212
{ca gln 74}P 41.097 24.306 14.281
{cb gln 74}42.417 23.612 14.499
{cg gln 74}42.449 22.69 15.697
{cd gln 74}43.837 22.117 15.845
{oe1 gln 74}44.371 21.55 14.93
{cd gln 74}P 43.837 22.117 15.845
{ne2 gln 74}44.412 22.377 16.978
{ca ser 75}P 39.482 25.382 17.498
{cb ser 75}38.269 24.744 18.17
{og ser 75}38.546 23.401 18.554
{ca tyr 76}P 41.799 26.723 20.204
{cb tyr 76}41.943 28.194 20.596
{cg tyr 76}42.514 29.13 19.561
{cd1 tyr 76}43.653 28.791 18.846
{ce1 tyr 76}44.196 29.624 17.885
{cz tyr 76}43.622 30.86 17.68
{oh tyr 76}44.177 31.71 16.73
{cg tyr 76}P 42.514 29.13 19.561
{cd2 tyr 76}41.982 30.392 19.355
{ce2 tyr 76}42.524 31.271 18.41
{cz tyr 76}43.622 30.86 17.68
{ca ser 77}P 39.785 24.858 22.852
{cb aser 77}38.807 25.667 23.688
{og aser 77}39.605 26.691 24.356
{ca thr 78}P 38.469 21.287 23.086
{cb thr 78}38.884 20.139 23.989
{og1 thr 78}38.578 20.542 25.296
{cb thr 78}P 38.884 20.139 23.989
{cg2 thr 78}40.34 19.741 23.922
{ca met 79}P 34.698 20.95 22.639
{cb met 79}34.186 21.464 21.244
{cg met 79}34.658 22.904 21.064
{sd met 79}33.873 23.617 19.602
{ce met 79}34.318 25.304 19.823
{ca ser 80}P 32.121 18.409 23.789
{cb ser 80}31.018 18.733 24.781
{og ser 80}30.293 17.535 24.924
{ca ile 81}P 31.354 16.194 20.779
{cb ile 81}32.395 16.188 19.68
{cg1 ile 81}33.576 15.297 19.986
{cd1 ile 81}34.485 15.061 18.767
{cb ile 81}P 32.395 16.188 19.68
{cg2 ile 81}32.842 17.634 19.305
{ca thr 82}P 29.454 12.967 20.011
{cb thr 82}27.984 12.813 20.247
{og1 thr 82}27.674 13.294 21.584
{cb thr 82}P 27.984 12.813 20.247
{cg2 thr 82}27.51 11.393 20.178
{ca asp 83}P 30.802 10.613 17.349
{cb aasp 83}32.207 9.993 17.426
{cg aasp 83}33.132 10.749 16.51
{od1aasp 83}33.283 11.939 16.469
{cg aasp 83}P 33.132 10.749 16.51
{od2aasp 83}33.719 9.922 15.683
{ca cys 84}P 28.27 8.461 15.508
{cb cys 84}26.994 9.142 14.987
{sg cys 84}26.141 10.139 16.242
{ca arg 85}P 29.483 5.397 13.585
{cb aarg 85}30.773 4.768 14.044
{cg aarg 85}31.797 4.443 12.971
{cd aarg 85}32.783 5.562 12.823
{ne aarg 85}33.478 5.806 14.079
{cz aarg 85}34.256 6.855 14.318
{nh1aarg 85}34.525 7.793 13.415
{cz aarg 85}P 34.256 6.855 14.318
{nh2aarg 85}34.788 6.963 15.546
{ca glu 86}P 27.37 2.907 11.686
{cb glu 86}27.262 2.935 10.17
{cg glu 86}26.111 2.267 9.637
{cd glu 86}25.902 2.215 8.097
{oe1 glu 86}24.849 1.865 7.765
{cd glu 86}P 25.902 2.215 8.097
{oe2 glu 86}26.905 2.571 7.451
{ca thr 87}P 27.206 -0.55 13.332
{cb thr 87}26.32 -0.895 14.522
{og1 thr 87}25.043 -1.219 14.038
{cb thr 87}P 26.32 -0.895 14.522
{cg2 thr 87}26.281 0.196 15.546
{ca ser 89}P 23.732 -4.382 12.046
{cb ser 89}23.057 -4.693 13.35
{og ser 89}23.609 -5.934 13.77
{ca ser 90}P 22.792 -1.132 10.239
{cb ser 90}23.758 -0.043 10.138
{og ser 90}23.088 1.119 9.621
{ca lys 91}P 20.555 -1.79 7.259
{cb alys 91}20.097 -3.23 7.331
{cg alys 91}19.393 -3.763 6.07
{cd alys 91}19.509 -5.27 5.948
{ce alys 91}18.897 -5.798 4.664
{nz alys 91}17.423 -5.762 4.728
{ca tyr 92}P 18.656 0.896 5.387
{cb tyr 92}19.152 1.481 4.054
{cg tyr 92}18.257 2.577 3.595
{cd1 tyr 92}18.393 3.903 4.069
{ce1 tyr 92}17.535 4.887 3.641
{cz tyr 92}16.498 4.556 2.735
{oh tyr 92}15.654 5.516 2.273
{cg tyr 92}P 18.257 2.577 3.595
{cd2 tyr 92}17.201 2.3 2.701
{ce2 tyr 92}16.355 3.284 2.291
{cz tyr 92}16.498 4.556 2.735
{ca pro 93}P 16.084 2.138 6.263
{cb pro 93}14.66 2.64 5.853
{cg pro 93}13.868 1.381 5.854
{cd pro 93}14.809 0.303 5.356
{n pro 93}P 16.213 0.874 5.626
{cd pro 93}14.809 0.303 5.356
{ca asn 94}P 16.942 0.899 9.749
{cb asn 94}16.341 -0.419 10.265
{cg asn 94}14.812 -0.502 10.069
{od1 asn 94}14.041 0.403 10.443
{cg asn 94}P 14.812 -0.502 10.069
{nd2 asn 94}14.388 -1.568 9.406
{ca cys 95}P 20.23 2.728 10.122
{cb cys 95}20.477 4.112 9.552
{sg cys 95}20.072 4.266 7.791
{ca ala 96}P 22.021 1.934 13.355
{cb ala 96}21.894 0.454 13.742
{ca tyr 97}P 24.868 3.697 15.059
{cb tyr 97}24.679 5.324 15.011
{cg tyr 97}24.35 5.734 13.552
{cd1 tyr 97}25.372 5.985 12.683
{ce1 tyr 97}25.132 6.255 11.341
{cz tyr 97}23.819 6.271 10.898
{oh tyr 97}23.522 6.571 9.597
{cg tyr 97}P 24.35 5.734 13.552
{cd2 tyr 97}23.056 5.751 13.108
{ce2 tyr 97}22.781 6.054 11.763
{cz tyr 97}23.819 6.271 10.898
{ca lys 98}P 27.288 3.45 17.931
{cb alys 98}28.628 2.761 17.826
{cg alys 98}29.486 2.691 19.097
{cd alys 98}28.922 1.673 20.046
{ce alys 98}29.453 1.674 21.471
{nz alys 98}28.549 0.774 22.275
{ca thr 99}P 27.414 6.613 20.086
{cb thr 99}26.184 6.914 20.988
{og1 thr 99}25.04 6.97 20.181
{cb thr 99}P 26.184 6.914 20.988
{cg2 thr 99}26.301 8.254 21.705
{ca thr 100}P 30.804 7.723 21.52
{cb thr 100}32.069 7.343 20.69
{og1 thr 100}31.946 6.036 20.277
{cb thr 100}P 32.069 7.343 20.69
{cg2 thr 100}33.325 7.431 21.623
{ca gln 101}P 31.314 10.813 23.712
{cb gln 101}30.929 10.937 25.184
{cg gln 101}29.618 10.516 25.724
{cd gln 101}29.55 10.645 27.263
{oe1 gln 101}30.526 10.51 28.055
{cd gln 101}P 29.55 10.645 27.263
{ne2 gln 101}28.329 10.936 27.698
{ca ala 102}P 34.56 12.789 23.426
{cb ala 102}35.192 12.373 22.111
{ca asn 103}P 36.138 16.172 24.199
{cb asn 103}36.323 16.599 25.643
{cg asn 103}35.059 16.758 26.458
{od1 asn 103}34.491 15.788 27.019
{cg asn 103}P 35.059 16.758 26.458
{nd2 asn 103}34.567 17.993 26.576
{ca lys 104}P 38.356 17.236 21.307
{cb alys 104}38.225 16.128 20.249
{cg alys 104}38.637 14.774 20.799
{cd alys 104}38.731 13.719 19.716
{ce alys 104}39.325 12.418 20.234
{nz alys 104}40.733 12.539 20.7
{ca his 105}P 39.408 20.143 19.191
{cb his 105}40.802 20.611 18.773
{cg his 105}41.691 20.885 19.977
{nd1 his 105}41.799 22.113 20.5
{ce1 his 105}42.633 21.99 21.55
{ne2 his 105}42.995 20.736 21.7
{cg his 105}P 41.691 20.885 19.977
{cd2 his 105}42.454 19.978 20.69
{ne2 his 105}42.995 20.736 21.7
{ca ile 106}P 37.336 20.475 16.023
{cb ile 106}35.859 20.809 16.094
{cg1 ile 106}35.585 22.254 16.335
{cd1 ile 106}34.123 22.7 16.04
{cb ile 106}P 35.859 20.809 16.094
{cg2 ile 106}35.225 19.938 17.163
{ca ile 107}P 38.447 21.312 12.498
{cb ile 107}39.573 20.547 11.821
{cg1 ile 107}40.754 20.351 12.824
{cd1 ile 107}41.923 19.549 12.396
{cb ile 107}P 39.573 20.547 11.821
{cg2 ile 107}40.087 21.276 10.601
{ca val 108}P 35.904 22.994 10.148
{cb val 108}34.779 23.811 10.855
{cg1 val 108}34.149 23.003 12.008
{cb val 108}P 34.779 23.811 10.855
{cg2 val 108}35.215 25.162 11.331
{ca ala 109}P 35.991 24.45 6.631
{cb ala 109}35.869 23.76 5.331
{ca cys 110}P 34.641 28.025 6.403
{cb cys 110}35.228 29.042 7.408
{sg cys 110}35.295 28.305 9.081
{ca glu 111}P 33.165 30.049 3.541
{cb glu 111}32.53 29.187 2.466
{cg glu 111}33.278 27.966 2.027
{cd glu 111}32.654 27.084 0.964
{oe1 glu 111}33.113 25.955 0.766
{cd glu 111}P 32.654 27.084 0.964
{oe2 glu 111}31.633 27.625 0.361
{ca asn 113}P 30.28 36.487 4.124
{cb asn 113}30.81 37.688 3.329
{cg asn 113}30.648 38.972 4.118
{od1 asn 113}29.768 39.806 3.744
{cg asn 113}P 30.648 38.972 4.118
{nd2 asn 113}31.42 39.138 5.21
{ca pro 114}P 29.614 36.247 7.061
{cb pro 114}28.775 36.148 8.376
{cg pro 114}27.338 36.287 8.045
{cd pro 114}27.271 36.569 6.56
{n pro 114}P 28.647 36.467 6.026
{cd pro 114}27.271 36.569 6.56
{ca tyr 115}P 32.421 33.646 7.152
{cb tyr 115}33.832 34.185 7.237
{cg tyr 115}34.94 33.302 6.761
{cd1 tyr 115}34.961 32.843 5.421
{ce1 tyr 115}35.984 32.064 4.918
{cz tyr 115}37.052 31.739 5.772
{oh tyr 115}38.078 31.024 5.325
{cg tyr 115}P 34.94 33.302 6.761
{cd2 tyr 115}36.005 32.979 7.594
{ce2 tyr 115}37.038 32.212 7.113
{cz tyr 115}37.052 31.739 5.772
{ca val 116}P 30.956 30.562 8.72
{cb val 116}29.396 30.786 8.751
{cg1 val 116}29.049 32.158 9.367
{cb val 116}P 29.396 30.786 8.751
{cg2 val 116}28.729 30.611 7.389
{ca pro 117}P 31.468 26.825 8.989
{cb pro 117}31.341 26.095 10.337
{cg pro 117}31.373 27.174 11.383
{cd pro 117}30.841 28.445 10.728
{n pro 117}P 31.178 28.232 9.269
{cd pro 117}30.841 28.445 10.728
{ca val 118}P 30.199 24.806 6.062
{cb val 118}30.244 25.494 4.674
{cg1 val 118}29.704 26.913 4.765
{cb val 118}P 30.244 25.494 4.674
{cg2 val 118}31.639 25.386 4.119
{ca his 119}P 31.921 21.422 6.588
{cb his 119}32.797 21.201 5.353
{cg his 119}33.676 20.032 5.314
{nd1 his 119}33.231 18.794 4.947
{ce1 his 119}34.275 17.972 5.026
{ne2 his 119}35.386 18.662 5.425
{cg his 119}P 33.676 20.032 5.314
{cd2 his 119}35.026 19.963 5.611
{ne2 his 119}35.386 18.662 5.425
{ca phe 120}P 33.115 19.358 9.579
{cb phe 120}32.124 18.58 10.437
{cg phe 120}32.747 18.22 11.776
{cd1 phe 120}33.513 17.087 11.885
{ce1 phe 120}34.128 16.776 13.109
{cz phe 120}33.928 17.636 14.158
{cg phe 120}P 32.747 18.22 11.776
{cd2 phe 120}32.529 19.069 12.843
{ce2 phe 120}33.124 18.742 14.095
{cz phe 120}33.928 17.636 14.158
{ca asp 121}P 36.574 18.085 8.688
{cb asp 121}37.687 19.059 8.326
{cg asp 121}38.591 18.482 7.257
{od1 asp 121}38.122 18.056 6.199
{cg asp 121}P 38.591 18.482 7.257
{od2 asp 121}39.825 18.37 7.422
{ca ala 122}P 37.795 16.256 11.776
{cb ala 122}39.302 16.113 11.434
{ca ser 123}P 38.148 16.103 15.564
{cb ser 123}37.08 15.578 16.451
{og ser 123}37.175 14.18 16.495
{ca val 124}P 41.74 15.965 16.948
{cb val 124}42.762 16.713 16.059
{cg1 val 124}42.668 16.292 14.591
{cb val 124}P 42.762 16.713 16.059
{cg2 val 124}42.703 18.191 16.159
{sg cys 65}P 39.937 22.3 4.744
{sg cys 72}39.251 22.332 6.591
{sg cys 26}P 25.791 8.872 17.75
{sg cys 84}26.141 10.139 16.242
{sg cys 40}P 21.387 3.103 6.806
{sg cys 95}20.072 4.266 7.791
{sg cys 58}P 34.23 29.527 10.215
{sg cys 110}35.295 28.305 9.081
@vectorlist {hydrogen} color=sky
{n ala 20}P 25.942 13.418 24.917
{h ala 20}26.878 13.253 24.611
{ca ala 20}P 24.976 12.317 24.602
{ha ala 20}24.134 12.707 24.14
{1hb ala 20}P 26.619 10.958 24.196
{cb ala 20}25.733 11.346 23.729
{2hb ala 20}25.09 10.502 23.472
{cb ala 20}P 25.733 11.346 23.729
{3hb ala 20}26.012 11.838 22.799
{n ser 21}P 23.359 11.415 26.179
{h ser 21}22.631 11.697 25.563
{ca ser 21}P 22.944 10.835 27.519
{ha ser 21}23.655 11.115 28.248
{1hb ser 21}P 21.232 11.111 28.782
{cb ser 21}21.652 11.587 27.901
{2hb ser 21}21.903 12.62 28.1
{og ser 21}P 20.696 11.571 26.829
{hg ser 21}20.151 10.791 26.899
{n ser 22}P 22.667 8.711 26.373
{h ser 22}22.821 9.234 25.547
{ca ser 22}P 22.41 7.269 26.298
{ha ser 22}22.876 6.785 27.13
{1hb ser 22}P 20.84 5.874 26.742
{cb ser 22}20.935 6.928 26.406
{2hb ser 22}20.452 7.546 27.144
{og ser 22}P 20.278 7.097 25.168
{hg ser 22}19.578 6.436 25.121
{n ser 23}P 22.99 5.368 24.963
{h ser 23}22.689 4.815 25.712
{ca ser 23}P 23.468 4.698 23.734
{ha ser 23}24.457 5.029 23.512
{1hb ser 23}P 24.045 2.74 23.058
{cb ser 23}23.621 3.188 23.974
{2hb ser 23}24.341 3.064 24.78
{og ser 23}P 22.413 2.696 24.277
{hg ser 23}22.064 2.811 25.153
{n asn 24}P 21.369 5.436 22.679
{h asn 24}21. 5.601 23.602
{ca asn 24}P 20.468 5.693 21.564
{ha asn 24}20.676 4.994 20.761
{1hb asn 24}P 18.723 5.655 22.843
{cb asn 24}19.009 5.364 21.857
{2hb asn 24}18.322 5.814 21.155
{1hd2 asn 24}P 18.355 3.602 23.614
{nd2 asn 24}18.474 3.167 22.703
{2hd2 asn 24}18.318 2.143 22.639
{n tyr 25}P 21.447 7.907 21.507
{h tyr 25}22.017 7.643 22.271
{ca tyr 25}P 21.563 9.292 21.001
{ha tyr 25}20.645 9.81 21.242
{1hb tyr 25}P 22.334 10.035 22.841
{cb tyr 25}22.66 10.039 21.79
{2hb tyr 25}23.582 9.49 21.744
{cd1 tyr 25}P 22.139 12.521 21.821
{hd1 tyr 25}21.437 12.367 22.62
{cd2 tyr 25}P 23.772 11.705 20.248
{hd2 tyr 25}24.346 10.885 19.827
{ce1 tyr 25}P 22.355 13.834 21.335
{he1 tyr 25}21.781 14.648 21.75
{ce2 tyr 25}P 23.969 13. 19.762
{he2 tyr 25}24.68 13.176 18.954
{oh tyr 25}P 23.459 15.292 19.765
{hh tyr 25}22.622 15.747 19.679
{n cys 26}P 22.752 8.646 19.021
{h cys 26}23.36 8.096 19.591
{ca cys 26}P 23.058 8.67 17.576
{ha cys 26}23.248 9.715 17.335
{1hb cys 26}P 24.387 6.986 17.633
{cb cys 26}24.326 7.963 17.205
{2hb cys 26}24.402 7.889 16.139
{n asn 27}P 21.3 7.068 17.159
{h asn 27}21.601 6.574 17.957
{ca asn 27}P 20.13 6.544 16.382
{ha asn 27}20.482 6.187 15.453
{1hb asn 27}P 19.507 5.414 18.132
{cb asn 27}19.597 5.281 17.048
{2hb asn 27}18.616 5.039 16.708
{1hd2 asn 27}P 19.713 3.174 18.467
{nd2 asn 27}20.4 3.139 17.728
{2hd2 asn 27}21.005 2.295 17.678
{n gln 28}P 18.703 8.227 17.343
{h gln 28}19.181 8.042 18.205
{ca gln 28}P 17.648 9.227 17.412
{ha gln 28}16.722 8.821 17.06
{1hb gln 28}P 18.245 10.08 19.294
{cb gln 28}17.368 9.617 18.876
{2hb gln 28}16.557 10.38 18.833
{1hg gln 28}P 15.821 8.253 19.526
{cg gln 28}16.895 8.466 19.725
{2hg gln 28}17.384 7.532 19.482
{1he2 gln 28}P 16.368 7.903 22.993
{ne2 gln 28}16.321 7.823 22.004
{2he2 gln 28}15.733 7.137 21.541
{n met 29}P 19.163 10.98 16.789
{h met 29}19.798 10.609 17.456
{ca met 29}P 19.577 12.206 16.105
{ha met 29}18.8 12.938 16.254
{1hb met 29}P 21.589 12.026 16.856
{cb met 29}20.8 12.797 16.793
{2hb met 29}21.207 13.593 16.176
{1hg met 29}P 20.09 12.677 18.913
{cg met 29}20.503 13.307 18.136
{2hg met 29}21.448 13.75 18.438
{1he met 29}P 21.435 15.91 17.856
{ce met 29}20.422 15.98 17.5
{2he met 29}20.421 15.77 16.416
{ce met 29}P 20.422 15.98 17.5
{3he met 29}19.943 16.929 17.692
{n met 30}P 20.424 10.999 14.205
{h met 30}20.682 10.249 14.832
{ca met 30}P 20.698 10.789 12.8
{ha met 30}21.303 11.596 12.435
{1hb met 30}P 21. 8.696 13.167
{cb met 30}21.484 9.51 12.617
{2hb met 30}21.486 9.266 11.564
{1hg met 30}P 23.017 10.003 14.136
{cg met 30}22.92 9.584 13.114
{2hg met 30}23.413 8.626 13.073
{1he met 30}P 23.384 9.686 10.261
{ce met 30}24.332 9.969 10.688
{2he met 30}24.804 10.723 10.079
{ce met 30}P 24.332 9.969 10.688
{3he met 30}24.955 9.115 10.885
{n lys 31}P 18.365 10.17 12.664
{h lys 31}18.476 9.776 13.566
{ca lys 31}P 17.038 10.097 12.03
{ha lys 31}17.175 9.779 11.017
{1hb lys 31}P 16.703 8.133 12.877
{cb lys 31}16.166 9.049 12.723
{2hb lys 31}15.796 9.478 13.642
{1hg lys 31}P 14.434 9.709 11.535
{cg lys 31}14.987 8.781 11.758
{2hg lys 31}15.382 8.44 10.787
{1hd lys 31}P 14.483 6.814 12.492
{cd lys 31}14.017 7.764 12.258
{2hd lys 31}13.476 8.118 13.137
{1he lys 31}P 13.119 8.065 10.238
{ce lys 31}12.966 7.502 11.131
{2he lys 31}12.986 6.432 10.92
{1hz lys 31}P 11.415 7.232 12.466
{nz lys 31}11.61 7.822 11.651
{2hz lys 31}11.531 8.813 11.868
{nz lys 31}P 11.61 7.822 11.651
{3hz lys 31}10.878 7.59 10.965
{n ser 32}P 16.295 12.097 13.232
{h ser 32}16.712 11.681 14.033
{ca ser 32}P 15.601 13.378 13.388
{ha ser 32}14.566 13.207 13.098
{1hb aser 32}P 14.643 14.6 14.9
{cb aser 32}15.404 13.816 14.849
{2hb aser 32}15.042 12.956 15.409
{og aser 32}P 16.64 14.208 15.316
{hg aser 32}16.66 14.285 16.273
{n arg 33}P 17.436 14.475 12.29
{h arg 33}18.03 13.757 12.645
{ca arg 33}P 18.079 15.473 11.443
{ha arg 33}17.506 16.388 11.566
{1hb arg 33}P 19.981 14.772 12.031
{cb arg 33}19.472 15.735 11.997
{2hb arg 33}20.046 16.316 11.292
{1hg arg 33}P 19.042 15.697 14.089
{cg arg 33}19.534 16.325 13.407
{2hg arg 33}20.547 16.315 13.75
{1hd arg 33}P 19.309 18.318 12.708
{cd arg 33}18.953 17.691 13.482
{2hd arg 33}17.896 17.631 13.288
{ne arg 33}P 19.055 18.307 14.784
{he arg 33}18.295 18.183 15.457
{1hh1 arg 33}P 22.013 19.626 14.85
{nh1 arg 33}21.191 19.136 14.483
{2hh1 arg 33}21.26 18.846 13.519
{1hh2 arg 33}P 19.373 19.219 17.123
{nh2 arg 33}20.15 19.36 16.504
{2hh2 arg 33}20.972 19.839 16.851
{n asn 34}P 17.347 14.083 9.616
{h asn 34}16.832 13.536 10.234
{ca asn 34}P 17.176 13.714 8.174
{ha asn 34}16.486 12.903 8.148
{1hb aasn 34}P 15.871 15.429 8.286
{cb aasn 34}16.416 14.887 7.517
{2hb aasn 34}17.158 15.589 7.129
{1hd2aasn 34}P 14.794 15.155 4.603
{nd2aasn 34}15.433 15.316 5.374
{2hd2aasn 34}16.048 16.115 5.301
{n leu 35}P 19.317 12.71 8.312
{h leu 35}19.17 12.613 9.281
{ca leu 35}P 20.608 12.205 7.775
{ha leu 35}20.882 12.886 6.959
{1hb leu 35}P 21.517 11.707 9.663
{cb leu 35}21.725 12.353 8.816
{2hb leu 35}22.686 12.123 8.385
{cg leu 35}P 21.804 13.814 9.368
{hg leu 35}20.838 14.009 9.871
{1hd1 leu 35}P 22.787 13.014 11.099
{cd1 leu 35}22.855 13.879 10.436
{2hd1 leu 35}23.834 13.901 9.967
{cd1 leu 35}P 22.855 13.879 10.436
{3hd1 leu 35}22.67 14.776 11.03
{1hd2 leu 35}P 21.118 14.956 7.641
{cd2 leu 35}21.953 14.886 8.349
{2hd2 leu 35}21.977 15.877 8.86
{cd2 leu 35}P 21.953 14.886 8.349
{3hd2 leu 35}22.876 14.787 7.779
{n thr 36}P 19.469 10.148 7.46
{h thr 36}18.773 10.455 8.094
{ca thr 36}P 19.27 8.753 6.966
{ha thr 36}20.201 8.432 6.615
{cb thr 36}P 19.028 7.886 8.215
{hb thr 36}19.033 6.833 7.818
{og1 thr 36}P 17.832 8.105 8.839
{hg1 thr 36}17.44 8.957 8.977
{1hg2 thr 36}P 21.181 7.928 8.667
{cg2 thr 36}20.21 8.003 9.191
{2hg2 thr 36}20.195 9.009 9.639
{cg2 thr 36}P 20.21 8.003 9.191
{3hg2 thr 36}20.114 7.281 9.976
{n lys 37}P 17.763 9.73 5.392
{h lys 37}18.165 10.616 5.591
{ca lys 37}P 16.571 9.74 4.494
{ha lys 37}15.759 9.296 5.048
{1hb lys 37}P 15.917 11.68 5.196
{cb lys 37}16.168 11.204 4.251
{2hb lys 37}17.033 11.689 3.798
{1hg lys 37}P 15.154 10.862 2.338
{cg lys 37}14.965 11.336 3.312
{2hg lys 37}14.1 10.821 3.748
{1hd lys 37}P 13.599 12.764 2.516
{cd lys 37}14.567 12.78 3.075
{2hd lys 37}14.344 13.213 4.031
{1he lys 37}P 15.522 14.624 2.441
{ce lys 37}15.523 13.564 2.203
{2he lys 37}16.541 13.196 2.227
{1hz lys 37}P 14.892 12.471 0.503
{nz lys 37}15.099 13.438 0.76
{2hz lys 37}14.248 13.976 0.624
{nz lys 37}P 15.099 13.438 0.76
{3hz lys 37}15.868 13.76 0.165
{n asp 38}P 17.873 9.175 2.575
{h asp 38}18.55 9.857 2.87
{ca asp 38}P 18.201 8.519 1.294
{ha asp 38}17.241 8.222 0.858
{1hb asp 38}P 19.732 9.88 0.731
{cb asp 38}18.834 9.419 0.304
{2hb asp 38}19.209 8.918 -0.579
{n arg 39}P 19.889 7.279 2.457
{h arg 39}19.886 8.092 3.03
{ca arg 39}P 20.841 6.198 2.738
{ha arg 39}20.424 5.25 2.607
{1hb arg 39}P 22.663 5.48 1.877
{cb arg 39}22.036 6.323 1.747
{2hb arg 39}21.633 6.236 0.752
{1hg arg 39}P 22.193 8.413 2.261
{cg arg 39}22.82 7.63 1.934
{2hg arg 39}23.475 7.493 2.792
{1hd arg 39}P 24.123 7.368 0.27
{cd arg 39}23.627 8.111 0.806
{2hd arg 39}22.965 8.592 0.103
{ne arg 39}P 24.574 9.166 1.261
{he arg 39}24.35 10.123 1.01
{1hh1 arg 39}P 25.638 6.94 2.149
{nh1 arg 39}26.189 7.78 2.276
{2hh1 arg 39}27.097 7.701 2.715
{1hh2 arg 39}P 26.269 10.96 1.784
{nh2 arg 39}26.545 10.033 2.061
{2hh2 arg 39}27.439 9.902 2.515
{n cys 40}P 21.98 5.353 4.694
{h cys 40}22.151 4.493 4.223
{ca cys 40}P 22.59 5.535 6.039
{ha cys 40}21.967 6.118 6.658
{1hb cys 40}P 23.572 3.658 6.156
{cb cys 40}22.819 4.207 6.711
{2hb cys 40}23.148 4.353 7.719
{n lys 41}P 24.013 7.43 6.345
{h lys 41}23.297 7.856 6.898
{ca lys 41}P 25.338 8.178 6.328
{ha lys 41}25.659 8.249 5.334
{1hb lys 41}P 24.249 9.969 6.215
{cb lys 41}25.033 9.562 6.884
{2hb lys 41}24.604 9.462 7.887
{1hg lys 41}P 27.029 10.055 7.492
{cg lys 41}26.197 10.481 6.907
{2hg lys 41}26.615 10.535 5.859
{1hd lys 41}P 25.104 12.324 7.
{cd lys 41}26.024 11.91 7.416
{2hd lys 41}25.975 11.94 8.491
{1he lys 41}P 28.036 12.179 6.574
{ce lys 41}27.199 12.781 6.952
{2he lys 41}26.865 13.43 6.132
{1hz lys 41}P 27.094 14.223 8.43
{nz lys 41}27.808 13.648 7.984
{2hz lys 41}28.339 13.067 8.639
{nz lys 41}P 27.808 13.648 7.984
{3hz lys 41}28.48 14.317 7.573
{ca pro 42}P 28.249 6.149 7.703
{ha pro 42}27.678 5.337 8.125
{1hb pro 42}P 30.21 5.411 7.199
{cb pro 42}29.334 5.604 6.788
{2hb pro 42}29.048 4.653 6.402
{1hg pro 42}P 29.97 7.349 5.984
{cg pro 42}29.423 6.646 5.714
{2hg pro 42}29.805 6.25 4.784
{1hd pro 42}P 27.975 8.143 5.203
{cd pro 42}28.016 7.142 5.532
{2hd pro 42}27.395 6.549 4.877
{n val 43}P 29.144 7.95 8.985
{h val 43}28.986 8.504 8.165
{ca val 43}P 29.768 8.615 10.125
{ha val 43}29.579 8.061 10.997
{cb aval 43}P 31.307 8.774 9.974
{hb aval 43}31.41 9.651 9.295
{1hg1aval 43}P 31.773 8.549 12.114
{cg1aval 43}32.004 9.181 11.296
{2hg1aval 43}33.06 9.234 11.167
{cg1aval 43}P 32.004 9.181 11.296
{3hg1aval 43}31.715 10.184 11.568
{1hg2aval 43}P 31.674 7.51 8.28
{cg2aval 43}32.047 7.659 9.29
{2hg2aval 43}33.102 7.86 9.181
{cg2aval 43}P 32.047 7.659 9.29
{3hg2aval 43}31.938 6.718 9.799
{n asn 44}P 29.144 10.488 11.482
{h asn 44}29.405 9.903 12.24
{ca asn 44}P 28.742 11.871 11.687
{ha asn 44}29.219 12.487 10.96
{1hb asn 44}P 26.906 11.553 10.571
{cb asn 44}27.269 12.059 11.453
{2hb asn 44}26.735 11.611 12.298
{1hd2 asn 44}P 25.678 14.96 12.222
{nd2 asn 44}25.953 13.986 12.242
{2hd2 asn 44}25.518 13.32 12.847
{n thr 82}P 29.978 14.351 20.061
{h thr 82}29.752 14.936 19.278
{ca thr 82}P 29.454 12.967 20.011
{ha thr 82}29.97 12.382 20.743
{cb thr 82}P 27.984 12.813 20.247
{hb thr 82}27.407 13.445 19.545
{og1 thr 82}P 27.674 13.294 21.584
{hg1 thr 82}28.105 12.78 22.278
{1hg2 thr 82}P 28.133 10.744 20.8
{cg2 thr 82}27.51 11.393 20.178
{2hg2 thr 82}26.492 11.279 20.568
{cg2 thr 82}P 27.51 11.393 20.178
{3hg2 thr 82}27.549 11.036 19.157
{n asp 83}P 30.48 11.296 18.586
{h asp 83}30.711 10.808 19.44
{ca asp 83}P 30.802 10.613 17.349
{ha asp 83}30.812 11.265 16.518
{1hb aasp 83}P 32.575 10.072 18.429
{cb aasp 83}32.207 9.993 17.426
{2hb aasp 83}32.217 8.946 17.186
{n cys 84}P 29.217 9.431 15.916
{h cys 84}29.52 10.084 15.2
{ca cys 84}P 28.27 8.461 15.508
{ha cys 84}27.943 7.828 16.285
{1hb cys 84}P 27.28 9.847 14.22
{cb cys 84}26.994 9.142 14.987
{2hb cys 84}26.321 8.428 14.619
{n arg 85}P 28.896 6.328 14.615
{h arg 85}28.563 5.906 15.453
{ca arg 85}P 29.483 5.397 13.585
{ha arg 85}29.614 5.946 12.693
{1hb aarg 85}P 31.153 5.409 14.83
{cb aarg 85}30.773 4.768 14.044
{2hb aarg 85}30.542 3.861 14.624
{1hg aarg 85}P 32.314 3.555 13.151
{cg aarg 85}31.797 4.443 12.971
{2hg aarg 85}31.323 4.3 12.018
{1hd aarg 85}P 33.442 5.404 12.019
{cd aarg 85}32.783 5.562 12.823
{2hd aarg 85}32.223 6.43 12.553
{ne aarg 85}P 33.478 5.806 14.079
{he aarg 85}33.378 5.154 14.865
{1hh1aarg 85}P 35.13 8.57 13.671
{nh1aarg 85}34.525 7.793 13.415
{2hh1aarg 85}34.162 7.756 12.481
{1hh2aarg 85}P 34.628 6.288 16.268
{nh2aarg 85}34.788 6.963 15.546
{2hh2aarg 85}35.385 7.761 15.744
{n glu 86}P 28.276 3.976 12.056
{h glu 86}28.733 4.488 11.331
{ca glu 86}P 27.37 2.907 11.686
{ha glu 86}26.431 3.108 12.117
{1hb glu 86}P 27.255 3.983 9.843
{cb glu 86}27.262 2.935 10.17
{2hb glu 86}28.206 2.519 9.768
{1hg glu 86}P 26.205 1.191 9.887
{cg glu 86}26.111 2.267 9.637
{2hg glu 86}25.142 2.554 10.032
{n thr 87}P 26.944 0.792 12.745
{h thr 87}25.972 1.06 12.75
{ca thr 87}P 27.206 -0.55 13.332
{ha thr 87}28.217 -0.556 13.68
{cb thr 87}P 26.32 -0.895 14.522
{hb thr 87}26.75 -1.813 15.012
{og1 thr 87}P 25.043 -1.219 14.038
{hg1 thr 87}24.361 -1.371 14.723
{1hg2 thr 87}P 26.268 1.195 15.148
{cg2 thr 87}26.281 0.196 15.546
{2hg2 thr 87}25.403 0.084 16.228
{cg2 thr 87}P 26.281 0.196 15.546
{3hg2 thr 87}27.187 0.102 16.176
{n gly 88}P 27.546 -2.806 12.587
{h gly 88}28.016 -2.955 13.435
{1ha gly 88}P 28.005 -3.684 10.765
{ca gly 88}27.478 -3.934 11.661
{2ha gly 88}28.041 -4.767 12.135
{n ser 89}P 25.104 -4.06 12.221
{h ser 89}25.35 -3.557 13.072
{ca ser 89}P 23.732 -4.382 12.046
{ha ser 89}23.662 -5.309 11.481
{1hb ser 89}P 23.233 -3.922 14.106
{cb ser 89}23.057 -4.693 13.35
{2hb ser 89}21.998 -4.819 13.207
{og ser 89}P 23.609 -5.934 13.77
{hg ser 89}23.206 -6.641 13.256
{n ser 90}P 23.485 -2.252 10.959
{h ser 90}24.455 -2.061 11.163
{ca ser 90}P 22.792 -1.132 10.239
{ha ser 90}21.949 -0.825 10.784
{1hb ser 90}P 24.235 0.243 11.077
{cb ser 90}23.758 -0.043 10.138
{2hb ser 90}24.543 -0.282 9.418
{og ser 90}P 23.088 1.119 9.621
{hg ser 90}23.054 1.057 8.679
{n lys 91}P 21.099 -1.388 8.565
{h lys 91}20.464 -0.929 9.185
{ca lys 91}P 20.555 -1.79 7.259
{ha lys 91}21.334 -1.662 6.532
{1hb alys 91}P 20.959 -3.863 7.56
{cb alys 91}20.097 -3.23 7.331
{2hb alys 91}19.386 -3.3 8.171
{1hg alys 91}P 18.342 -3.458 6.069
{cg alys 91}19.393 -3.763 6.07
{2hg alys 91}19.834 -3.316 5.177
{1hd alys 91}P 20.574 -5.542 5.925
{cd alys 91}19.509 -5.27 5.948
{2hd alys 91}19.058 -5.754 6.812
{1he alys 91}P 19.212 -5.204 3.809
{ce alys 91}18.897 -5.798 4.664
{2he alys 91}19.187 -6.839 4.504
{1hz alys 91}P 17.049 -6.05 5.641
{nz alys 91}17.423 -5.762 4.728
{2hz alys 91}17.082 -4.82 4.555
{nz alys 91}P 17.423 -5.762 4.728
{3hz alys 91}17.04 -6.429 4.04
{n tyr 92}P 19.657 -0.104 5.865
{h tyr 92}20.528 -0.087 5.364
{ca tyr 92}P 18.656 0.896 5.387
{ha tyr 92}18.623 1.685 6.071
{1hb tyr 92}P 20.18 1.826 4.172
{cb tyr 92}19.152 1.481 4.054
{2hb tyr 92}19.168 0.657 3.347
{cd1 tyr 92}P 18.393 3.903 4.069
{hd1 tyr 92}19.189 4.134 4.758
{cd2 tyr 92}P 17.201 2.3 2.701
{hd2 tyr 92}17.081 1.272 2.345
{ce1 tyr 92}P 17.535 4.887 3.641
{he1 tyr 92}17.66 5.899 3.982
{ce2 tyr 92}P 16.355 3.284 2.291
{he2 tyr 92}15.547 3.053 1.573
{oh tyr 92}P 15.654 5.516 2.273
{hh tyr 92}14.733 5.22 2.127
{ca pro 93}P 16.084 2.138 6.263
{ha pro 93}16.79 2.876 6.079
{1hb pro 93}P 14.287 3.342 6.434
{cb pro 93}14.66 2.64 5.853
{2hb pro 93}14.72 3.123 4.916
{1hg pro 93}P 13.567 1.175 6.702
{cg pro 93}13.868 1.381 5.854
{2hg pro 93}13.002 1.413 5.2
{1hd pro 93}P 14.705 -0.608 5.886
{cd pro 93}14.809 0.303 5.356
{2hd pro 93}14.732 0.084 4.308
{n asn 94}P 16.685 0.996 8.27
{h asn 94}16.758 0.149 7.781
{ca asn 94}P 16.942 0.899 9.749
{ha asn 94}16.356 1.635 10.232
{1hb asn 94}P 16.834 -1.25 9.784
{cb asn 94}16.341 -0.419 10.265
{2hb asn 94}16.529 -0.509 11.331
{1hd2 asn 94}P 15.027 -2.286 9.087
{nd2 asn 94}14.388 -1.568 9.406
{2hd2 asn 94}13.38 -1.689 9.221
{n cys 95}P 18.822 2.35 9.914
{h cys 95}18.222 3.089 9.631
{ca cys 95}P 20.23 2.728 10.122
{ha cys 95}20.83 2.059 9.577
{1hb cys 95}P 19.88 4.838 10.066
{cb cys 95}20.477 4.112 9.552
{2hb cys 95}21.516 4.366 9.627
{n ala 96}P 21.644 2.122 11.943
{h ala 96}22.26 1.769 11.296
{ca ala 96}P 22.021 1.934 13.355
{ha ala 96}21.366 2.484 13.98
{1hb ala 96}P 22.056 -0.181 12.895
{cb ala 96}21.894 0.454 13.742
{2hb ala 96}22.604 0.217 14.523
{cb ala 96}P 21.894 0.454 13.742
{3hb ala 96}20.899 0.277 14.129
{n tyr 97}P 23.631 3.082 14.678
{h tyr 97}22.849 3.263 15.31
{ca tyr 97}P 24.868 3.697 15.059
{ha tyr 97}25.61 3.525 14.347
{1hb tyr 97}P 23.892 5.536 15.695
{cb tyr 97}24.679 5.324 15.011
{2hb tyr 97}25.596 5.721 15.333
{cd1 tyr 97}P 25.372 5.985 12.683
{hd1 tyr 97}26.426 5.941 13.008
{cd2 tyr 97}P 23.056 5.751 13.108
{hd2 tyr 97}22.226 5.535 13.782
{ce1 tyr 97}P 25.132 6.255 11.341
{he1 tyr 97}25.976 6.456 10.687
{ce2 tyr 97}P 22.781 6.054 11.763
{he2 tyr 97}21.748 6.068 11.409
{oh tyr 97}P 23.522 6.571 9.597
{hh tyr 97}24.102 6.102 8.973
{n lys 98}P 26.647 3.47 16.601
{h lys 98}27.285 3.674 15.861
{ca lys 98}P 27.288 3.45 17.931
{ha lys 98}26.66 3.054 18.655
{1hb alys 98}P 28.506 1.747 17.433
{cb alys 98}28.628 2.761 17.826
{2hb alys 98}29.215 3.33 17.071
{1hg alys 98}P 30.524 2.414 18.813
{cg alys 98}29.486 2.691 19.097
{2hg alys 98}29.564 3.659 19.572
{1hd alys 98}P 27.835 1.771 20.144
{cd alys 98}28.922 1.673 20.046
{2hd alys 98}29.093 0.662 19.632
{1he alys 98}P 30.448 1.276 21.537
{ce alys 98}29.453 1.674 21.471
{2he alys 98}29.386 2.655 21.918
{1hz alys 98}P 28.529 -0.153 21.862
{nz alys 98}28.549 0.774 22.275
{2hz alys 98}28.901 0.685 23.236
{nz alys 98}P 28.549 0.774 22.275
{3hz alys 98}27.629 1.2 22.343
{n thr 99}P 27.219 5.287 19.526
{h thr 99}26.797 4.629 20.149
{ca thr 99}P 27.414 6.613 20.086
{ha thr 99}27.482 7.349 19.35
{cb thr 99}P 26.184 6.914 20.988
{hb thr 99}26.091 6.102 21.734
{og1 thr 99}P 25.04 6.97 20.181
{hg1 thr 99}24.725 6.079 19.914
{1hg2 thr 99}P 27.176 8.377 22.277
{cg2 thr 99}26.301 8.254 21.705
{2hg2 thr 99}26.209 9.051 20.938
{cg2 thr 99}P 26.301 8.254 21.705
{3hg2 thr 99}25.415 8.356 22.354
{n thr 100}P 29.572 7.552 20.753
{h thr 100}29.432 8.212 19.989
{ca thr 100}P 30.804 7.723 21.52
{ha thr 100}30.794 7.097 22.372
{cb thr 100}P 32.069 7.343 20.69
{hb thr 100}32.169 8.034 19.857
{og1 thr 100}P 31.946 6.036 20.277
{hg1 thr 100}31.658 5.375 20.942
{1hg2 thr 100}P 33.145 6.936 22.542
{cg2 thr 100}33.325 7.431 21.623
{2hg2 thr 100}34.177 6.973 21.078
{cg2 thr 100}P 33.325 7.431 21.623
{3hg2 thr 100}33.564 8.48 21.761
{n gln 101}P 31.12 9.423 23.186
{h gln 101}31.186 8.692 23.868
{ca gln 101}P 31.314 10.813 23.712
{ha gln 101}30.752 11.497 23.143
{1hb gln 101}P 31.729 10.387 25.751
{cb gln 101}30.929 10.937 25.184
{2hb gln 101}31.097 12.014 25.464
{1hg gln 101}P 28.748 11.031 25.331
{cg gln 101}29.618 10.516 25.724
{2hg gln 101}29.467 9.453 25.551
{1he2 gln 101}P 27.552 11.04 27.072
{ne2 gln 101}28.329 10.936 27.698
{2he2 gln 101}28.143 11.043 28.678
@group {RNAse mc,Hb} animate
@vectorlist {mc} instance= {main ch} color=bluetint
@vectorlist {Hbonds} color= purple 
<1.957>{lys 7 hn} P U 23.19 24.161 5.561
{thr 3 o} U 23.093 24.725 4.316
<2.047>{phe 8 hn} P U 25.231 23.473 7.041
{ala 4 o} U 25.788 24.16 5.913
<2.258>{glu 9 hn} P U 24.447 24.083 9.689
{ala 5 o} U 24.734 25.328 8.758
<2.011>{arg 10 hn} P U 22.327 22.304 9.882
{ala 6 o} U 22.127 23.232 8.843
<1.907>{gln 11 hn} P U 23.605 19.881 9.752
{lys 7 o} U 23.9 20.556 8.639
<2.043>{his 12 hn} P U 25.059 19.839 11.914
{phe 8 o} U 25.517 21.021 11.251
<2.105>{met 13 hn} P U 24.596 20.633 13.865
{glu 9 o} U 23.469 21.285 13.175
<1.891>{asp 14 hn} P U 25.272 20.602 18.415
{val 47 o} U 26.449 20.594 19.022
<2.699>{thr 17 hn} P U 22.483 20.097 23.449
{asp 14 o} U 23.656 20.279 21.979
<2.200>{tyr 25 hn} P U 21.995 7.572 22.273
{ser 22 o} U 22.909 7.48 23.509
<2.036>{gln 28 hn} P U 19.205 8.019 18.182
{asn 24 o} U 19.64 7.575 19.464
<1.898>{met 29 hn} P U 19.788 10.508 17.41
{tyr 25 o} U 20.653 10.196 18.37
<1.907>{met 30 hn} P U 20.681 10.3 14.873
{cys 26 o} U 21.238 9.243 15.469
<2.568>{lys 31 hn} P U 18.513 9.769 13.568
{asn 27 o} U 18.475 8.349 14.67
<1.935>{ser 32 hn} P U 16.741 11.71 14.039
{gln 28 o} U 17.015 11.161 15.247
<2.051>{arg 33 hn} P U 17.982 13.748 12.706
{met 29 o} U 19.062 13.215 13.487
<2.091>{asn 34 hn} P U 16.942 13.52 10.336
{lys 31 o} U 16.153 12.379 10.803
<2.090>{leu 35 hn} P U 19.116 12.621 9.287
{met 30 o} U 19.194 11.677 10.402
<2.918>{lys 37 hn} P U 18.294 10.557 5.575
{asn 34 o} U 18.492 12.534 6.049
<2.037>{asn 44 hn} P U 29.355 9.892 12.256
{cys 84 o} U 29.288 8.715 13.057
<1.939>{phe 46 hn} P U 28.579 14.475 16.623
{thr 82 o} U 29.189 13.477 17.312
<1.748>{val 47 hn} P U 27.519 18.844 17.053
{his 12 o} U 27.126 19.2 15.95
<1.845>{his 48 hn} P U 29.155 19.317 21.091
{ser 80 o} U 30.27 18.903 21.594
<2.493>{glu 49 hn} P U 27.539 22.39 20.904
{val 47 o} U 27.129 21.13 19.769
<2.273>{val 54 hn} P U 30.075 27.842 18.187
{ser 50 o} U 28.871 27.367 19.112
<1.823>{gln 55 hn} P U 30.093 29.008 15.955
{leu 51 o} U 28.927 29.055 16.473
<2.041>{ala 56 hn} P U 32.2 30.706 16.485
{ala 52 o} U 31.208 31.081 17.442
<2.197>{val 57 hn} P U 34.362 29.085 15.591
{val 54 o} U 33.234 28.183 15.065
<2.218>{cys 58 hn} P U 35.11 29.951 13.177
{gln 55 o} U 33.766 30.692 13.411
<2.090>{ser 59 hn} P U 37.106 31.66 13.554
{ala 56 o} U 36.608 31.527 14.923
<2.043>{gln 60 hn} P U 39.382 30.724 13.537
{val 57 o} U 38.494 29.608 13.427
<2.393>{lys 61 hn} P U 42.208 28.415 15.164
{gln 74 o} U 41.613 26.895 15.54
<1.990>{val 63 hn} P U 43.565 25.974 8.89
{cys 72 o} U 42.241 26.282 8.583
<1.807>{cys 65 hn} P U 42.749 22.099 4.73
{gln 69 o} U 42.877 22.787 3.676
<1.951>{gly 68 hn} P U 43.246 18.771 2.577
{cys 65 o} U 43.434 18.94 3.919
<1.916>{tyr 73 hn} P U 39.2 24.859 9.671
{val 108 o} U 37.948 24.596 9.268
<1.812>{gln 74 hn} P U 41.863 25.77 12.877
{lys 61 o} U 42.743 26.581 12.457
<1.924>{ser 75 hn} P U 39.469 23.723 16.124
{ile 106 o} U 38.889 22.726 15.428
<1.777>{met 79 hn} P U 36.531 20.084 22.055
{lys 104 o} U 37.053 19.492 21.093
<1.952>{ile 81 hn} P U 32.489 16.268 22.668
{ala 102 o} U 33.312 15.392 23.318
<1.891>{thr 82 hn} P U 29.683 15.003 19.363
{phe 46 o} U 29.325 16.104 18.722
<1.801>{asp 83 hn} P U 30.757 10.912 19.467
{thr 100 o} U 30.836 10.322 20.578
<1.850>{cys 84 hn} P U 29.472 10.105 15.222
{asn 44 o} U 29.386 11.056 14.348
<2.041>{arg 85 hn} P U 28.508 6.007 15.479
{lys 98 o} U 28.218 5.779 16.859
<1.974>{glu 86 hn} P U 28.719 4.511 11.337
{pro 42 o} U 28.956 5.48 10.381
<1.993>{thr 87 hn} P U 26.017 1.166 12.744
{ala 96 o} U 24.821 1.885 12.744
<2.146>{ser 90 hn} P U 24.452 -2.21 11.209
{thr 87 o} U 25.832 -1.618 11.194
<2.101>{lys 91 hn} P U 20.54 -0.922 9.251
{asn 94 o} U 19.565 -0.164 10.049
<1.946>{asn 94 hn} P U 16.766 0.21 7.657
{lys 91 o} U 17.889 -0.553 7.553
<2.324>{cys 95 hn} P U 18.148 3.042 9.655
{pro 93 o} U 16.813 3.177 8.735
<1.687>{lys 98 hn} P U 27.176 3.501 15.753
{arg 85 o} U 27.752 3.616 14.728
<2.022>{thr 100 hn} P U 29.365 8.178 20.001
{asp 83 o} U 29.441 8.585 18.648
<1.995>{ala 102 hn} P U 32.424 13.049 23.165
{ile 81 o} U 31.554 13.737 22.317
<2.115>{lys 104 hn} P U 36.368 17.479 22.059
{met 79 o} U 35.188 18.276 22.468
<1.903>{ile 107 hn} P U 37.458 19.824 13.634
{ala 122 o} U 37.517 18.496 13.543
<2.009>{val 108 hn} P U 37.569 23.394 11.5
{tyr 73 o} U 38.659 24.138 11.985
<1.953>{ala 109 hn} P U 34.96 23.002 7.838
{his 119 o} U 33.906 22.208 8.194
<2.046>{cys 110 hn} P U 36.402 26.932 6.074
{asn 71 o} U 37.82 26.744 6.007
<1.963>{glu 111 hn} P U 32.659 29.268 5.528
{val 116 o} U 31.972 28.997 6.687
<2.141>{val 116 hn} P U 31.321 31.437 6.785
{glu 111 o} U 31.356 31.179 5.309
<1.839>{val 118 hn} P U 31.982 25.451 7.029
{ala 109 o} U 33.269 25.417 7.029
<2.562>{his 119 hn} P U 32.151 23.461 7.121
{ala 109 o} U 33.319 24.82 7.057
<1.830>{asp 121 hn} P U 35.645 19.608 9.852
{ile 107 o} U 36.334 20.181 10.767
<2.344>{ala 122 hn} P U 37.023 18.117 11.197
{ile 107 o} U 36.747 19.734 11.17
<1.927>{val 124 hn} P U 39.941 17.21 16.875
{his 105 o} U 39.113 18.189 17.294
@kinemage 5 (B&T Fig. 2.9)
Ribonuclease A, part 2 - a Calpha+SS representation and a smooth spline representation (gold helices and seagreen beta strands).  Animate to switch between them.  (from PDB file 7RSA)
@multibins 3
@zoom 1.26
@zslab 190
@center 29.473 17.439 12.911
@matrix
-.223205 -.654964 .721942 -.819636 -.274772 -.50269 .527614 -.703933 -.475501
@2zoom 1.32
@2zslab 160
@2center 31.039 16.413 12.313
@2matrix 
.507393 -.337652 -.792807 .720314 -.338786 .605286 -.472968 -.878189 .071317
@group {RNAse ca,ss} animate
@vectorlist {Calphas} color=white
{ca lys 1}P 17.586 25.166 -1.492
{ca glu 2}19.24 24.741 1.886
{ca thr 3}22.444 26.745 2.238
{ca ala 4}25.727 25.053 3.145
{ca ala 5}25.745 27.011 6.425
{ca ala 6}22.267 25.744 7.297
{ca lys 7}23.192 22.195 6.327
{ca phe 8}26.159 22.41 8.754
{ca glu 9}23.875 23.417 11.595
{ca arg 10}21.453 20.602 10.796
{ca gln 11}24.054 17.905 10.457
{ca his 12}26.447 18.922 13.244
{ca met 13}25.04 21.192 15.911
{ca asp 14}23.344 20.093 19.09
{ca ser 15}23.394 23.049 21.522
{ca ser 16}20.414 21.565 23.422
{ca thr 17}22.44 18.943 25.241
{ca ser 18}25.847 19.045 26.931
{ca ala 19}26.701 15.481 25.857
{ca ala 20}24.976 12.317 24.602
{ca ser 21}22.944 10.835 27.519
{ca ser 22}22.41 7.269 26.298
{ca ser 23}23.468 4.698 23.734
{ca asn 24}20.468 5.693 21.564
{ca tyr 25}21.563 9.292 21.001
{ca cys 26}23.058 8.67 17.576
{ca asn 27}20.13 6.544 16.382
{ca gln 28}17.648 9.227 17.412
{ca met 29}19.577 12.206 16.105
{ca met 30}20.698 10.789 12.8
{ca lys 31}17.038 10.097 12.03
{ca ser 32}15.601 13.378 13.388
{ca arg 33}18.079 15.473 11.443
{ca asn 34}17.176 13.714 8.174
{ca leu 35}20.608 12.205 7.775
{ca thr 36}19.27 8.753 6.966
{ca lys 37}16.571 9.74 4.494
{ca asp 38}18.201 8.519 1.294
{ca arg 39}20.841 6.198 2.738
{ca cys 40}22.59 5.535 6.039
{ca lys 41}25.338 8.178 6.328
{ca pro 42}28.249 6.149 7.703
{ca val 43}29.768 8.615 10.125
{ca asn 44}28.742 11.871 11.687
{ca thr 45}29.822 14.193 14.539
{ca phe 46}27.506 16.355 16.675
{ca val 47}28.924 19.368 18.598
{ca his 48}27.462 20.244 22.
{ca glu 49}28.365 23.897 22.126
{ca ser 50}26.764 27.227 21.378
{ca leu 51}26.507 28.033 17.651
{ca ala 52}28.432 31.269 18.291
{ca asp 53}31.347 29.343 19.79
{ca val 54}31.485 27.069 16.731
{ca gln 55}31.136 29.969 14.269
{ca ala 56}34.056 31.615 16.074
{ca val 57}36.375 28.767 14.982
{ca cys 58}36.46 30.466 11.561
{ca ser 59}38.691 33.121 13.147
{ca gln 60}40.942 30.596 14.995
{ca lys 61}43.934 28.481 13.811
{ca asn 62}44.181 28.19 10.053
{ca val 63}45.102 24.621 9.008
{ca ala 64}44.964 22.539 5.828
{ca cys 65}41.807 20.378 5.589
{ca lys 66}42.298 16.607 5.164
{ca asn 67}41.804 17.034 1.362
{ca gly 68}44.403 19.789 1.119
{ca gln 69}42.153 22.846 0.966
{ca thr 70}43.368 25.782 3.031
{ca asn 71}40.058 27.129 4.337
{ca cys 72}40.05 24.898 7.409
{ca tyr 73}40.319 26.124 10.998
{ca gln 74}41.097 24.306 14.281
{ca ser 75}39.482 25.382 17.498
{ca tyr 76}41.799 26.723 20.204
{ca ser 77}39.785 24.858 22.852
{ca thr 78}38.469 21.287 23.086
{ca met 79}34.698 20.95 22.639
{ca ser 80}32.121 18.409 23.789
{ca ile 81}31.354 16.194 20.779
{ca thr 82}29.454 12.967 20.011
{ca asp 83}30.802 10.613 17.349
{ca cys 84}28.27 8.461 15.508
{ca arg 85}29.483 5.397 13.585
{ca glu 86}27.37 2.907 11.686
{ca thr 87}27.206 -0.55 13.332
{ca gly 88}27.478 -3.934 11.661
{ca ser 89}23.732 -4.382 12.046
{ca ser 90}22.792 -1.132 10.239
{ca lys 91}20.555 -1.79 7.259
{ca tyr 92}18.656 0.896 5.387
{ca pro 93}16.084 2.138 6.263
{ca asn 94}16.942 0.899 9.749
{ca cys 95}20.23 2.728 10.122
{ca ala 96}22.021 1.934 13.355
{ca tyr 97}24.868 3.697 15.059
{ca lys 98}27.288 3.45 17.931
{ca thr 99}27.414 6.613 20.086
{ca thr 100}30.804 7.723 21.52
{ca gln 101}31.314 10.813 23.712
{ca ala 102}34.56 12.789 23.426
{ca asn 103}36.138 16.172 24.199
{ca lys 104}38.356 17.236 21.307
{ca his 105}39.408 20.143 19.191
{ca ile 106}37.336 20.475 16.023
{ca ile 107}38.447 21.312 12.498
{ca val 108}35.904 22.994 10.148
{ca ala 109}35.991 24.45 6.631
{ca cys 110}34.641 28.025 6.403
{ca glu 111}33.165 30.049 3.541
{ca gly 112}31.175 33.138 2.666
{ca asn 113}30.28 36.487 4.124
{ca pro 114}29.614 36.247 7.061
{ca tyr 115}32.421 33.646 7.152
{ca val 116}30.956 30.562 8.72
{ca pro 117}31.468 26.825 8.989
{ca val 118}30.199 24.806 6.062
{ca his 119}31.921 21.422 6.588
{ca phe 120}33.115 19.358 9.579
{ca asp 121}36.574 18.085 8.688
{ca ala 122}37.795 16.256 11.776
{ca ser 123}38.148 16.103 15.564
{ca val 124}41.74 15.965 16.948
@vectorlist {SS} color=gold
{ca cys 65}P 41.807 20.378 5.589
{cb cys 65}40.654 20.633 4.615
{sg cys 65}39.937 22.3 4.744
{sg cys 72}39.251 22.332 6.591
{cb cys 72}40.448 23.495 7.421
{ca cys 72}40.05 24.898 7.409
{ca cys 26}P 23.058 8.67 17.576
{cb cys 26}24.326 7.963 17.205
{sg cys 26}25.791 8.872 17.75
{sg cys 84}26.141 10.139 16.242
{cb cys 84}26.994 9.142 14.987
{ca cys 84}28.27 8.461 15.508
{ca cys 40}P 22.59 5.535 6.039
{cb cys 40}22.819 4.207 6.711
{sg cys 40}21.387 3.103 6.806
{sg cys 95}20.072 4.266 7.791
{cb cys 95}20.477 4.112 9.552
{ca cys 95}20.23 2.728 10.122
{ca cys 58}P 36.46 30.466 11.561
{cb cys 58}35.26 30.882 10.715
{sg cys 58}34.23 29.527 10.215
{sg cys 110}35.295 28.305 9.081
{cb cys 110}35.228 29.042 7.408
{ca cys 110}34.641 28.025 6.403
@group dominant {RNS spline} animate
@vectorlist {rib loop} color=white
{R2 lys 1}P 17.586 25.166 -1.492
{R2 lys 1}17.615 25.122 -1.354
{R2 lys 1}17.721 25.03 -0.994
{R2 lys 1}17.933 24.947 -0.499
{R2 glu 2}18.279 24.93 0.049
{R2 glu 2}18.777 25.022 0.577
{R2 glu 2}19.402 25.191 1.06
{R2 glu 2}20.116 25.392 1.487
{R2 thr 3}20.883 25.578 1.846
{R2 thr 3}21.67 25.712 2.132
{R2 thr 3}22.467 25.798 2.38
{R2 thr 3}23.269 25.849 2.634
{R2 ala 4}24.07 25.879 2.937
@vectorlist {rib hlx} color= gold 
{R2 ala 4}P 24.07 25.879 2.937
{R2 ala 4}24.849 25.905 3.323
{R2 ala 4}25.52 25.949 3.791
{R2 ala 4}25.984 26.039 4.333
{R2 ala 5}26.138 26.201 4.939
{R2 ala 5}25.918 26.439 5.587
{R2 ala 5}25.405 26.664 6.21
{R2 ala 5}24.715 26.766 6.727
{R2 ala 6}23.965 26.633 7.057
{R2 ala 6}23.267 26.192 7.148
{R2 ala 6}22.716 25.516 7.062
{R2 ala 6}22.398 24.716 6.89
{R2 lys 7}22.404 23.902 6.723
{R2 lys 7}22.782 23.176 6.643
{R2 lys 7}23.416 22.595 6.695
{R2 lys 7}24.154 22.208 6.919
{R2 phe 8}24.839 22.061 7.352
{R2 phe 8}25.34 22.176 8.007
{R2 phe 8}25.602 22.461 8.798
{R2 phe 8}25.594 22.796 9.613
{R2 glu 9}25.283 23.061 10.342
{R2 glu 9}24.668 23.155 10.893
{R2 glu 9}23.876 23.051 11.248
{R2 glu 9}23.063 22.74 11.41
{R2 arg 10}22.388 22.211 11.381
{R2 arg 10}21.978 21.478 11.179
{R2 arg 10}21.848 20.635 10.892
{R2 arg 10}21.984 19.798 10.626
{R2 gln 11}22.371 19.084 10.485
{R2 gln 11}22.976 18.587 10.552
{R2 gln 11}23.7 18.311 10.812
{R2 gln 11}24.421 18.239 11.23
{R2 his 12}25.022 18.353 11.769
{R2 his 12}25.408 18.627 12.396
{R2 his 12}25.589 19.004 13.086
{R2 his 12}25.598 19.415 13.814
{R2 met 13}25.471 19.796 14.559
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{R2 met 13}P 25.471 19.796 14.559
{R2 met 13}25.243 20.094 15.3
{R2 met 13}24.949 20.324 16.034
{R2 met 13}24.627 20.516 16.761
{R2 asp 14}24.313 20.7 17.481
{R2 asp 14}24.035 20.9 18.192
{R2 asp 14}23.778 21.123 18.889
{R2 asp 14}23.516 21.371 19.564
{R2 ser 15}23.224 21.645 20.211
{R2 ser 15}22.889 21.934 20.824
{R2 ser 15}22.536 22.181 21.403
{R2 ser 15}22.2 22.315 21.95
{R2 ser 16}21.919 22.266 22.467
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{R2 ser 16}P 21.919 22.266 22.467
{R2 ser 16}21.725 21.988 22.958
{R2 ser 16}21.645 21.543 23.427
{R2 ser 16}21.702 21.016 23.88
{R2 thr 17}21.922 20.492 24.326
{R2 thr 17}22.313 20.038 24.764
{R2 thr 17}22.835 19.644 25.178
{R2 thr 17}23.431 19.28 25.546
{R2 ser 18}24.046 18.916 25.845
{R2 ser 18}24.628 18.524 26.057
{R2 ser 18}25.143 18.085 26.179
{R2 ser 18}25.559 17.58 26.21
{R2 ala 19}25.846 16.991 26.149
{R2 ala 19}25.981 16.31 26.005
{R2 ala 19}25.973 15.569 25.823
{R2 ala 19}25.839 14.809 25.657
{R2 ala 20}25.598 14.073 25.562
{R2 ala 20}25.269 13.391 25.578
{R2 ala 20}24.882 12.755 25.687
{R2 ala 20}24.468 12.145 25.859
{R2 ser 21}24.059 11.543 26.063
{R2 ser 21}23.685 10.929 26.267
{R2 ser 21}23.363 10.298 26.428
{R2 ser 21}23.108 9.644 26.504
{R2 ser 22}22.934 8.961 26.452
{R2 ser 22}22.848 8.249 26.24
{R2 ser 22}22.814 7.529 25.887
{R2 ser 22}22.79 6.825 25.421
{R2 ser 23}22.732 6.163 24.872
{R2 ser 23}22.607 5.575 24.27
{R2 ser 23}22.425 5.124 23.656
{R2 ser 23}22.204 4.878 23.071
{R2 asn 24}21.966 4.906 22.555
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{R2 asn 24}P 21.966 4.906 22.555
{R2 asn 24}21.735 5.25 22.137
{R2 asn 24}21.553 5.839 21.789
{R2 asn 24}21.47 6.576 21.469
{R2 tyr 25}21.532 7.361 21.135
{R2 tyr 25}21.764 8.099 20.751
{R2 tyr 25}22.098 8.706 20.302
{R2 tyr 25}22.438 9.099 19.776
{R2 cys 26}22.694 9.198 19.163
{R2 cys 26}22.783 8.957 18.469
{R2 cys 26}22.678 8.484 17.77
{R2 cys 26}22.361 7.923 17.157
{R2 asn 27}21.816 7.421 16.724
{R2 asn 27}21.052 7.101 16.535
{R2 asn 27}20.177 7.008 16.547
{R2 asn 27}19.324 7.168 16.688
{R2 gln 28}18.628 7.604 16.887
{R2 gln 28}18.197 8.316 17.076
{R2 gln 28}18.037 9.192 17.192
{R2 gln 28}18.131 10.095 17.176
{R2 met 29}18.461 10.886 16.969
{R2 met 29}18.987 11.452 16.531
{R2 met 29}19.592 11.775 15.911
{R2 met 29}20.134 11.86 15.177
{R2 met 30}20.473 11.712 14.4
{R2 met 30}20.501 11.357 13.647
{R2 met 30}20.233 10.903 12.982
{R2 met 30}19.719 10.478 12.468
{R2 lys 31}19.005 10.21 12.168
{R2 lys 31}18.153 10.2 12.121
{R2 lys 31}17.284 10.447 12.265
{R2 lys 31}16.531 10.92 12.514
{R2 ser 32}16.026 11.59 12.783
{R2 ser 32}15.863 12.413 12.992
{R2 ser 32}15.975 13.279 13.086
{R2 ser 32}16.253 14.064 13.02
{R2 arg 33}16.588 14.64 12.746
{R2 arg 33}16.893 14.918 12.24
{R2 arg 33}17.166 14.935 11.57
{R2 arg 33}17.425 14.764 10.828
{R2 asn 34}17.688 14.477 10.106
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{R2 asn 34}P 17.688 14.477 10.106
{R2 asn 34}17.972 14.132 9.48
{R2 asn 34}18.29 13.733 8.964
{R2 asn 34}18.655 13.269 8.556
{R2 leu 35}19.077 12.728 8.254
{R2 leu 35}19.548 12.113 8.049
{R2 leu 35}19.982 11.469 7.891
{R2 leu 35}20.272 10.854 7.726
{R2 thr 36}20.312 10.327 7.497
{R2 thr 36}20.031 9.933 7.157
{R2 thr 36}19.51 9.667 6.702
{R2 thr 36}18.863 9.513 6.139
{R2 lys 37}18.208 9.454 5.473
{R2 lys 37}17.65 9.465 4.723
{R2 lys 37}17.249 9.487 3.957
{R2 lys 37}17.052 9.454 3.253
{R2 asp 38}17.11 9.301 2.691
{R2 asp 38}17.445 8.981 2.335
{R2 asp 38}17.992 8.537 2.183
{R2 asp 38}18.657 8.028 2.219
{R2 arg 39}19.351 7.517 2.425
{R2 arg 39}19.998 7.059 2.78
{R2 arg 39}20.598 6.684 3.241
{R2 arg 39}21.168 6.416 3.761
{R2 cys 40}21.725 6.28 4.292
{R2 cys 40}22.283 6.287 4.794
{R2 cys 40}22.853 6.399 5.254
{R2 cys 40}23.443 6.567 5.666
{R2 lys 41}24.061 6.743 6.023
{R2 lys 41}24.711 6.885 6.327
{R2 lys 41}25.378 6.994 6.602
{R2 lys 41}26.044 7.079 6.88
{R2 pro 42}26.691 7.149 7.193
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{R2 pro 42}P 26.691 7.149 7.193
{R2 pro 42}27.299 7.219 7.565
{R2 pro 42}27.847 7.326 7.989
{R2 pro 42}28.315 7.513 8.449
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{R2 val 43}28.931 8.283 9.419
{R2 val 43}29.086 8.866 9.916
{R2 val 43}29.173 9.53 10.423
{R2 asn 44}29.218 10.231 10.942
{R2 asn 44}29.245 10.934 11.474
{R2 asn 44}29.25 11.625 12.02
{R2 asn 44}29.229 12.296 12.582
{R2 thr 45}29.175 12.941 13.161
{R2 thr 45}29.083 13.555 13.755
{R2 thr 45}28.963 14.149 14.356
{R2 thr 45}28.829 14.736 14.952
{R2 phe 46}28.692 15.332 15.53
{R2 phe 46}28.565 15.943 16.083
{R2 phe 46}28.452 16.562 16.625
{R2 phe 46}28.358 17.17 17.172
{R2 val 47}28.286 17.754 17.742
{R2 val 47}28.239 18.303 18.344
{R2 val 47}28.208 18.827 18.962
{R2 val 47}28.182 19.341 19.572
{R2 his 48}28.15 19.859 20.149
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{R2 his 48}P 28.15 19.859 20.149
{R2 his 48}28.105 20.398 20.671
{R2 his 48}28.046 20.97 21.119
{R2 his 48}27.978 21.591 21.474
{R2 glu 49}27.902 22.275 21.717
{R2 glu 49}27.82 23.026 21.834
{R2 glu 49}27.725 23.812 21.824
{R2 glu 49}27.611 24.592 21.689
{R2 ser 50}27.468 25.325 21.431
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{R2 ser 50}P 27.468 25.325 21.431
{R2 ser 50}27.294 25.98 21.056
{R2 ser 50}27.11 26.578 20.583
{R2 ser 50}26.94 27.149 20.035
{R2 leu 51}26.811 27.724 19.435
{R2 leu 51}26.749 28.324 18.817
{R2 leu 51}26.79 28.929 18.268
{R2 leu 51}26.97 29.509 17.883
{R2 ala 52}27.325 30.032 17.761
{R2 ala 52}27.874 30.462 17.957
{R2 ala 52}28.555 30.741 18.365
{R2 ala 52}29.289 30.802 18.834
{R2 asp 53}29.998 30.579 19.216
{R2 asp 53}30.61 30.047 19.385
{R2 asp 53}31.092 29.328 19.315
{R2 asp 53}31.421 28.585 19.004
{R2 val 54}31.571 27.98 18.449
{R2 val 54}31.537 27.647 17.673
{R2 val 54}31.394 27.602 16.793
{R2 val 54}31.234 27.832 15.949
{R2 gln 55}31.148 28.323 15.282
{R2 gln 55}31.215 29.038 14.899
{R2 gln 55}31.446 29.84 14.774
{R2 gln 55}31.838 30.566 14.842
{R2 ala 56}32.385 31.055 15.044
{R2 ala 56}33.072 31.187 15.31
{R2 ala 56}33.826 31.023 15.547
{R2 ala 56}34.563 30.664 15.655
{R2 val 57}35.199 30.214 15.533
{R2 val 57}35.671 29.774 15.118
{R2 val 57}36.003 29.437 14.491
{R2 val 57}36.239 29.294 13.77
{R2 cys 58}36.426 29.434 13.073
{R2 cys 58}36.608 29.906 12.502
{R2 cys 58}36.818 30.58 12.104
{R2 cys 58}37.089 31.282 11.911
{R2 ser 59}37.454 31.84 11.954
{R2 ser 59}37.934 32.119 12.242
{R2 ser 59}38.507 32.136 12.693
{R2 ser 59}39.142 31.947 13.199
{R2 gln 60}39.804 31.61 13.654
{R2 gln 60}40.464 31.177 13.971
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{R2 gln 60}P 40.464 31.177 13.971
{R2 gln 60}41.105 30.691 14.127
{R2 gln 60}41.712 30.193 14.116
{R2 lys 61}42.271 29.725 13.936
{R2 lys 61}42.77 29.314 13.588
{R2 lys 61}43.205 28.945 13.111
{R2 lys 61}43.577 28.588 12.547
{R2 asn 62}43.885 28.214 11.944
{R2 asn 62}44.13 27.8 11.337
{R2 asn 62}44.324 27.337 10.739
{R2 asn 62}44.479 26.823 10.151
{R2 val 63}44.609 26.256 9.579
{R2 val 63}44.721 25.638 9.024
{R2 val 63}44.791 24.989 8.489
{R2 val 63}44.791 24.334 7.975
{R2 ala 64}44.693 23.697 7.485
{R2 ala 64}44.479 23.097 7.023
{R2 ala 64}44.173 22.516 6.6
{R2 ala 64}43.814 21.931 6.234
{R2 cys 65}43.438 21.318 5.938
{R2 cys 65}43.077 20.657 5.718
{R2 cys 65}42.744 19.955 5.533
{R2 cys 65}42.448 19.222 5.335
{R2 lys 66}42.198 18.47 5.073
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{R2 lys 66}P 42.198 18.47 5.073
{R2 lys 66}42.003 17.724 4.711
{R2 lys 66}41.881 17.068 4.265
{R2 lys 66}41.847 16.598 3.769
{R2 asn 67}41.919 16.413 3.252
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{R2 asn 67}P 41.919 16.413 3.252
{R2 asn 67}42.104 16.578 2.744
{R2 asn 67}42.36 17.028 2.273
{R2 asn 67}42.636 17.665 1.862
{R2 gly 68}42.88 18.393 1.538
{R2 gly 68}43.051 19.13 1.319
{R2 gly 68}43.148 19.864 1.203
{R2 gly 68}43.182 20.597 1.178
{R2 gln 69}43.163 21.333 1.235
{R2 gln 69}43.099 22.071 1.365
{R2 gln 69}42.994 22.8 1.56
{R2 gln 69}42.851 23.505 1.814
{R2 thr 70}42.672 24.172 2.12
{R2 thr 70}42.46 24.783 2.472
{R2 thr 70}42.213 25.313 2.867
{R2 thr 70}41.93 25.736 3.3
{R2 asn 71}41.611 26.025 3.768
{R2 asn 71}41.26 26.163 4.27
{R2 asn 71}40.908 26.179 4.813
{R2 asn 71}40.593 26.113 5.407
{R2 cys 72}40.352 26.003 6.063
{R2 cys 72}40.213 25.884 6.786
{R2 cys 72}40.165 25.765 7.564
{R2 cys 72}40.184 25.651 8.381
{R2 tyr 73}40.25 25.545 9.221
{R2 tyr 73}40.341 25.451 10.069
{R2 tyr 73}40.435 25.366 10.92
{R2 tyr 73}40.512 25.284 11.768
{R2 gln 74}40.551 25.203 12.608
{R2 gln 74}40.539 25.121 13.438
{R2 gln 74}40.495 25.061 14.255
{R2 gln 74}40.446 25.048 15.056
{R2 ser 75}40.418 25.107 15.841
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{R2 ser 75}P 40.418 25.107 15.841
{R2 ser 75}40.431 25.253 16.609
{R2 ser 75}40.477 25.451 17.358
{R2 ser 75}40.541 25.651 18.09
{R2 tyr 76}40.607 25.807 18.804
{R2 tyr 76}40.66 25.877 19.497
{R2 tyr 76}40.674 25.84 20.158
{R2 tyr 76}40.626 25.679 20.771
{R2 ser 77}40.489 25.381 21.322
{R2 ser 77}40.246 24.94 21.797
{R2 ser 77}39.903 24.396 22.191
{R2 ser 77}39.477 23.799 22.497
{R2 thr 78}38.981 23.2 22.711
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{R2 thr 78}P 38.981 23.2 22.711
{R2 thr 78}38.428 22.639 22.835
{R2 thr 78}37.824 22.122 22.893
{R2 thr 78}37.173 21.645 22.917
{R2 met 79}36.478 21.204 22.939
{R2 met 79}35.75 20.793 22.979
{R2 met 79}35.015 20.39 23.021
{R2 met 79}34.307 19.975 23.037
{R2 ser 80}33.66 19.523 23.
{R2 ser 80}33.098 19.018 22.889
{R2 ser 80}32.612 18.464 22.702
{R2 ser 80}32.183 17.869 22.446
{R2 ile 81}31.794 17.244 22.124
{R2 ile 81}31.431 16.597 21.745
{R2 ile 81}31.1 15.932 21.323
{R2 ile 81}30.813 15.255 20.877
{R2 thr 82}30.58 14.569 20.424
{R2 thr 82}30.409 13.879 19.977
{R2 thr 82}30.281 13.195 19.53
{R2 thr 82}30.178 12.525 19.071
{R2 asp 83}30.075 11.88 18.591
{R2 asp 83}29.958 11.264 18.08
{R2 asp 83}29.824 10.667 17.551
{R2 asp 83}29.678 10.077 17.016
{R2 cys 84}29.525 9.478 16.49
{R2 cys 84}29.367 8.86 15.984
{R2 cys 84}29.209 8.222 15.495
{R2 cys 84}29.056 7.568 15.016
{R2 arg 85}28.911 6.901 14.542
{R2 arg 85}28.777 6.222 14.071
{R2 arg 85}28.642 5.533 13.628
{R2 arg 85}28.491 4.832 13.239
{R2 glu 86}28.312 4.119 12.933
{R2 glu 86}28.097 3.394 12.73
{R2 glu 86}27.868 2.652 12.612
{R2 glu 86}27.655 1.89 12.553
{R2 thr 87}27.487 1.104 12.528
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{R2 thr 87}P 27.487 1.104 12.528
{R2 thr 87}27.381 0.292 12.512
{R2 thr 87}27.308 -0.54 12.493
{R2 thr 87}27.225 -1.386 12.458
{R2 gly 88}27.088 -2.237 12.396
{R2 gly 88}26.865 -3.071 12.301
{R2 gly 88}26.553 -3.806 12.175
{R2 gly 88}26.157 -4.345 12.026
{R2 ser 89}25.684 -4.589 11.862
{R2 ser 89}25.144 -4.478 11.685
{R2 ser 89}24.566 -4.097 11.476
{R2 ser 89}23.984 -3.571 11.211
{R2 ser 90}23.433 -3.02 10.867
{R2 ser 90}22.936 -2.545 10.428
{R2 ser 90}22.479 -2.148 9.911
{R2 ser 90}22.04 -1.809 9.341
{R2 lys 91}21.594 -1.508 8.744
{R2 lys 91}21.121 -1.223 8.142
{R2 lys 91}20.614 -0.923 7.552
{R2 lys 91}20.069 -0.577 6.986
{R2 tyr 92}19.482 -0.152 6.458
{R2 tyr 92}18.853 0.363 5.989
{R2 tyr 92}18.206 0.903 5.637
{R2 tyr 92}17.569 1.381 5.468
{R2 pro 93}16.969 1.711 5.548
{R2 pro 93}16.44 1.834 5.914
{R2 pro 93}16.043 1.804 6.492
{R2 pro 93}15.846 1.7 7.176
{R2 asn 94}15.914 1.605 7.863
{R2 asn 94}16.288 1.58 8.47
{R2 asn 94}16.896 1.622 9.001
{R2 asn 94}17.638 1.711 9.481
{R2 cys 95}18.416 1.826 9.936
{R2 cys 95}19.149 1.948 10.388
{R2 cys 95}19.83 2.073 10.851
{R2 cys 95}20.472 2.199 11.335
{R2 ala 96}21.089 2.326 11.849
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{R2 ala 96}P 21.089 2.326 11.849
{R2 ala 96}21.691 2.451 12.402
{R2 ala 96}22.287 2.578 12.983
{R2 ala 96}22.886 2.714 13.579
{R2 tyr 97}23.497 2.861 14.177
{R2 tyr 97}24.121 3.026 14.767
{R2 tyr 97}24.739 3.215 15.352
{R2 tyr 97}25.325 3.434 15.938
{R2 lys 98}25.851 3.69 16.533
{R2 lys 98}26.302 3.989 17.137
{R2 lys 98}26.696 4.331 17.741
{R2 lys 98}27.063 4.717 18.33
{R2 thr 99}27.432 5.145 18.889
{R2 thr 99}27.825 5.613 19.407
{R2 thr 99}28.244 6.113 19.891
{R2 thr 99}28.684 6.633 20.354
{R2 thr 100}29.141 7.162 20.806
{R2 thr 100}29.61 7.692 21.255
{R2 thr 100}30.087 8.226 21.692
{R2 thr 100}30.567 8.773 22.102
{R2 gln 101}31.047 9.34 22.473
{R2 gln 101}31.525 9.932 22.792
{R2 gln 101}32.008 10.547 23.06
{R2 gln 101}32.505 11.179 23.279
{R2 ala 102}33.026 11.825 23.451
{R2 ala 102}33.576 12.48 23.577
{R2 ala 102}34.143 13.134 23.649
{R2 ala 102}34.711 13.779 23.658
{R2 asn 103}35.263 14.405 23.595
{R2 asn 103}35.787 15.004 23.452
{R2 asn 103}36.282 15.578 23.226
{R2 asn 103}36.753 16.13 22.913
{R2 lys 104}37.203 16.664 22.512
{R2 lys 104}37.632 17.183 22.025
{R2 lys 104}38.014 17.684 21.468
{R2 lys 104}38.322 18.167 20.862
{R2 his 105}38.525 18.628 20.226
{R2 his 105}38.604 19.066 19.577
{R2 his 105}38.583 19.47 18.91
{R2 his 105}38.496 19.83 18.218
{R2 ile 106}38.377 20.137 17.49
{R2 ile 106}38.253 20.384 16.722
{R2 ile 106}38.127 20.594 15.928
{R2 ile 106}37.995 20.792 15.124
{R2 ile 107}37.852 21.006 14.329
{R2 ile 107}37.695 21.257 13.555
{R2 ile 107}37.518 21.544 12.8
{R2 ile 107}37.318 21.862 12.059
{R2 val 108}37.09 22.205 11.324
{R2 val 108}36.834 22.569 10.593
{R2 val 108}36.563 22.964 9.878
{R2 val 108}36.295 23.397 9.197
{R2 ala 109}36.047 23.88 8.566
{R2 ala 109}35.83 24.418 7.997
{R2 ala 109}35.628 25.005 7.482
{R2 ala 109}35.42 25.631 7.011
{R2 cys 110}35.186 26.285 6.572
{R2 cys 110}34.907 26.957 6.153
{R2 cys 110}34.587 27.638 5.745
{R2 cys 110}34.232 28.321 5.336
{R2 glu 111}33.85 28.997 4.918
{R2 glu 111}33.448 29.661 4.488
{R2 glu 111}33.036 30.324 4.076
{R2 glu 111}32.623 31. 3.722
{R2 gly 112}32.218 31.704 3.464
@vectorlist {rib loop} color=white
{R2 gly 112}P 32.218 31.704 3.464
{R2 gly 112}31.829 32.444 3.334
{R2 gly 112}31.452 33.208 3.34
{R2 gly 112}31.081 33.98 3.482
{R2 asn 113}30.708 34.743 3.761
{R2 asn 113}30.339 35.47 4.167
{R2 asn 113}30.017 36.092 4.657
{R2 asn 113}29.798 36.53 5.176
{R2 pro 114}29.737 36.705 5.67
{R2 pro 114}29.868 36.564 6.097
{R2 pro 114}30.14 36.164 6.459
{R2 pro 114}30.482 35.588 6.769
{R2 tyr 115}30.821 34.918 7.04
@vectorlist {rib beta} color=sea
{R2 tyr 115}P 30.821 34.918 7.04
{R2 tyr 115}31.099 34.222 7.286
{R2 tyr 115}31.305 33.51 7.515
{R2 tyr 115}31.437 32.774 7.734
{R2 val 116}31.497 32.009 7.951
{R2 val 116}31.489 31.213 8.166
{R2 val 116}31.428 30.398 8.35
{R2 val 116}31.335 29.582 8.467
{R2 pro 117}31.228 28.782 8.48
{R2 pro 117}31.126 28.012 8.365
{R2 pro 117}31.037 27.269 8.146
{R2 pro 117}30.971 26.549 7.861
{R2 val 118}30.934 25.845 7.547
{R2 val 118}30.936 25.152 7.242
{R2 val 118}30.985 24.468 6.99
{R2 val 118}31.092 23.788 6.834
{R2 his 119}31.265 23.11 6.818
{R2 his 119}31.513 22.434 6.971
{R2 his 119}31.833 21.774 7.251
{R2 his 119}32.218 21.145 7.602
{R2 phe 120}32.663 20.566 7.965
{R2 phe 120}33.161 20.047 8.296
{R2 phe 120}33.7 19.58 8.595
{R2 phe 120}34.266 19.15 8.873
{R2 asp 121}34.847 18.741 9.142
{R2 asp 121}35.426 18.343 9.418
{R2 asp 121}35.982 17.96 9.733
{R2 asp 121}36.49 17.598 10.122
{R2 ala 122}36.926 17.264 10.622
{R2 ala 122}37.275 16.964 11.254
{R2 ala 122}37.57 16.704 11.982
{R2 ala 122}37.854 16.488 12.757
{R2 ser 123}38.169 16.32 13.528
{R2 ser 123}38.55 16.203 14.253
{R2 ser 123}38.997 16.125 14.913
{R2 ser 123}39.505 16.076 15.498
{R2 val 124}40.064 16.041 15.998
{R2 val 124}40.654 16.012 16.401
{R2 val 124}41.194 15.987 16.7
{R2 val 124}41.588 15.971 16.885
{R2 val 124}41.74 15.965 16.948
@vectorlist {arrowheads} color=sea
{R2 his 48} P U 28.15 19.859 20.149
U 27.577 19.253 18.444
{R2 his 48} P U 28.15 19.859 20.149
U 28.859 18.268 19.411
{R2 ser 16} P U 21.919 22.266 22.467
U 21.939 22.085 20.578
{R2 ser 16} P U 21.919 22.266 22.467
U 23.468 22.722 21.469
{R2 lys 66} P U 42.198 18.47 5.073
U 43.18 20.07 4.795
{R2 lys 66} P U 42.198 18.47 5.073
U 42.207 19.839 6.388
{R2 ser 75} P U 40.418 25.107 15.841
U 41.101 25.686 14.167
{R2 ser 75} P U 40.418 25.107 15.841
U 39.852 24.281 14.228
{R2 thr 87} P U 27.487 1.104 12.528
U 28.697 2.541 12.257
{R2 thr 87} P U 27.487 1.104 12.528
U 26.965 2.891 12.9
{R2 gly 112} P U 32.218 31.704 3.464
U 33.629 30.449 3.271
{R2 gly 112} P U 32.218 31.704 3.464
U 32.374 30.235 4.655
{R2 val 124} P U 41.74 15.965 16.948
U 40.121 16.882 16.574
{R2 val 124} P U 41.74 15.965 16.948
U 40.419 15.179 15.834
@kinemage 6
@caption (B&T Fig. 2-13b,c)
Calmodulin Calpha backbone, showing that it is made up of four "EF hand" Calcium-binding motifs.  E helices are pink, Ca-binding loops are seagreen, F helices are skyblue, Ca++ are yellowtint crosses, and ligand sidechains are yellow.  Click on "ANIMATE" for a tour, in increasing detail.  (from PDB file 3CLN)
@onewidth 
@multibins 3
@zoom 1.0
@zslab 140
@center -2.638 29.235 19.049
@matrix <d1 like 2-13c>
-.154819 -.701288 -.695863 -.512519 0.659174 -.550285 .844604 .271448 -.461476
@2zoom 1.0
@2zslab 120
@2center -2.638 29.235 19.049
@2matrix <d2 like 2-13c>
-.879706 -.474325 -.033644 -.461524 .834641 .300616 -.114509 .279981 -.953152
@3zoom 2.0
@3zslab 130
@3center 9.557 17.022 11.959
@3matrix <2 sites>
-.286963 -.46109 .839671 .694969 .503061 .513758 -.659295 .730975 .176084
@4zoom 3.58
@4zslab 120
@4center 11.416 23.758 9.341
@4matrix <site 4>
-.414006 -.605384 .679786 .611562 .368158 .700321 -.674233 .705669 .217811
@group {calmodulin} animate moview= 1 
@subgroup {Calphas} dominant
@vectorlist {ends} color=white
{ca leu 39} P 2.786 45.648 32.145
{ca gly 40} 6.062 47.3 31.022
{ca gln 41} 4.986 48.226 27.455
{ca asn 42} 4.588 51.89 26.443
{ca pro 43} 2.58 51.83 23.236
{ca thr 44} 2.014 55.053 21.29
{ca met 76} P -9.673 31.878 23.853
{ca lys 77} -10.293 29.138 21.24
{ca asp 78} -7.196 29.999 19.19
{ca thr 79} -4.917 29.856 22.249
{ca asp 80} -6.314 26.41 23.052
{ca ser 81} -5.287 25.541 19.503
{ca glu 82} -1.752 26.96 19.484
{ca gly 113} P 2.03 2.437 13.838
{ca glu 114} 3.803 3.36 10.602
{ca lys 115} 7.297 1.989 9.843
{ca leu 116} 8.649 4.371 7.195
{ca thr 117} 12.05 4.085 5.485
@vectorlist {E helix 1,2} color= pink 
{ca thr 5} P -22.134 30.524 31.536
{ca glu 6} -23.237 32.552 34.591
{ca glu 7} -19.898 31.887 36.322
{ca gln 8} -18.223 32.421 32.939
{ca ile 9} -19.502 35.971 32.394
{ca ala 10} -18.466 36.763 35.983
{ca glu 11} -14.901 35.674 35.185
{ca phe 12} -15.01 37.78 32.01
{ca lys 13} -16.474 40.656 34.032
{ca glu 14} -13.481 40.484 36.368
{ca ala 15} -11.087 40.67 33.422
{ca phe 16} -13.026 43.677 31.966
{ca ser 17} -12.792 45.597 35.227
{ca leu 18} -8.966 45.631 35.193
{ca phe 19} -9.151 47.628 31.97
{ca asp 20} -12.162 49.791 32.955
{ca thr 44} P 2.014 55.053 21.29
{ca glu 45} -1.515 56.482 20.914
{ca ala 46} -1.527 55.213 17.306
{ca glu 47} -.834 51.647 18.41
{ca leu 48} -3.457 52.01 21.164
{ca gln 49} -5.944 53.259 18.537
{ca asp 50} -5.342 50.17 16.352
{ca met 51} -5.851 47.874 19.389
{ca ile 52} -9.295 49.484 20.059
{ca asn 53} -10.446 49.527 16.397
{ca glu 54} -9.94 45.815 16.074
{ca val 55} -12.457 45.134 18.907
{ca asp 56} -14.735 48.151 18.586
@vectorlist {E helix 3,4} color= pink 
{ca glu 82} P -1.752 26.96 19.484
{ca glu 83} -1.38 25.033 22.74
{ca glu 84} -2.444 21.64 21.347
{ca ile 85} -.06 22.227 18.451
{ca arg 86} 2.673 23.415 20.837
{ca glu 87} 2.212 20.042 22.545
{ca ala 88} 2.52 17.735 19.571
{ca phe 89} 5.685 19.677 18.663
{ca arg 90} 7.228 18.748 22.03
{ca val 91} 6.472 15.037 21.731
{ca phe 92} 7.887 15.081 18.187
{ca asp 93} 11.015 17.016 19.296
{ca lys 94} 12.497 14.19 21.353
{ca thr 117} P 12.05 4.085 5.485
{ca asp 118} 14.577 6.93 5.77
{ca glu 119} 13.527 7.937 2.234
{ca glu 120} 9.83 8.325 3.044
{ca val 121} 10.669 10.437 6.135
{ca asp 122} 13.075 12.553 4.111
{ca glu 123} 10.207 13.343 1.73
{ca met 124} 8.072 14.439 4.692
{ca ile 125} 10.75 16.847 5.993
{ca arg 126} 11.371 18.236 2.471
{ca glu 127} 7.724 18.974 1.862
{ca ala 128} 7.571 21.118 5.02
{ca asn 129} 11.14 22.484 5.227
@vectorlist {Ca loop 1,2} color=sea
{ca asp 20} P -12.162 49.791 32.955
{ca lys 21} -10.315 51.935 35.524
{ca asp 22} -13.104 54.465 36.113
{ca gly 23} -15.839 51.847 35.877
{ca asp 24} -18.032 53.715 33.367
{ca gly 25} -18.609 50.526 31.347
{ca thr 26} -16.14 51.149 28.517
{ca ile 27} -12.493 50.841 27.669
{ca thr 28} -10.723 53.815 26.191
{ca asp 56} P -14.735 48.151 18.586
{ca ala 57} -17.664 46.585 16.658
{ca asp 58} -20.001 49.631 16.463
{ca gly 59} -17.344 52.341 15.929
{ca asn 60} -18.184 54.574 18.86
{ca gly 61} -14.439 54.515 19.616
{ca thr 62} -14.579 52.517 22.836
{ca ile 63} -15.07 48.964 23.936
{ca asp 64} -17.969 47.847 26.075
@vectorlist {Ca loop 3,4} color=sea
{ca lys 94} P 12.497 14.19 21.353
{ca asp 95} 15.732 16.121 22.164
{ca gly 96} 14.054 19.448 23.07
{ca asn 97} 16.412 21.228 20.674
{ca gly 98} 13.79 23.244 18.782
{ca tyr 99} 13.925 21.042 15.674
{ca ile 100} 12.281 17.894 14.44
{ca ser 101} 14.92 15.873 12.492
{ca asn 129} P 11.14 22.484 5.227
{ca ile 130} 11.162 26.175 4.22
{ca asp 131} 14.49 27.585 5.494
{ca gly 132} 16.074 24.483 3.963
{ca asp 133} 17.961 23.224 7.01
{ca gly 134} 16.597 19.67 6.441
{ca gln 135} 14.802 20.011 9.811
{ca val 136} 11.302 21.075 10.853
{ca asn 137} 11.008 23.901 13.32
@vectorlist {F helix 1,2} color= sky 
{ca thr 28} P -10.723 53.815 26.191
{ca thr 29} -7.357 54.115 24.504
{ca lys 30} -6.147 55.805 27.717
{ca glu 31} -7.322 52.995 30.032
{ca leu 32} -5.888 50.381 27.651
{ca gly 33} -2.756 52.513 27.734
{ca thr 34} -2.353 52.387 31.559
{ca val 35} -2.695 48.603 31.674
{ca met 36} -.178 48.111 28.842
{ca arg 37} 2.153 50.354 30.839
{ca ser 38} 1.571 48.625 34.163
{ca leu 39} 2.786 45.648 32.145
{ca asp 64} P -17.969 47.847 26.075
{ca phe 65} -18.56 44.466 27.775
{ca pro 66} -20.359 42.667 24.954
{ca glu 67} -17.574 43.705 22.486
{ca phe 68} -14.777 42.604 24.913
{ca leu 69} -16.624 39.386 25.794
{ca thr 70} -17.019 38.495 22.112
{ca met 71} -13.371 39.368 21.286
{ca met 72} -12.293 37.28 24.289
{ca ala 73} -14.453 34.24 23.434
{ca arg 74} -13.068 33.718 19.893
{ca lys 75} -9.463 34.351 20.961
{ca met 76} -9.673 31.878 23.853
@vectorlist {F helix 3,4} color= sky 
{ca ser 101} P 14.92 15.873 12.492
{ca ala 102} 14.314 12.795 10.319
{ca ala 103} 15.453 10.44 13.083
{ca glu 104} 12.85 11.993 15.399
{ca leu 105} 9.881 11.946 13.
{ca arg 106} 10.773 8.368 12.077
{ca his 107} 10.869 7.219 15.761
{ca val 108} 7.512 8.783 16.616
{ca met 109} 5.998 7.736 13.245
{ca thr 110} 6.769 4.154 14.259
{ca asn 111} 4.94 4.588 17.601
{ca leu 112} 1.869 5.768 15.597
{ca gly 113} 2.03 2.437 13.838
{ca asn 137} P 11.008 23.901 13.32
{ca tyr 138} 7.918 25.107 15.152
{ca glu 139} 7.168 27.636 12.441
{ca glu 140} 7.39 25.044 9.626
{ca phe 141} 5.474 22.608 11.866
{ca val 142} 2.377 24.816 12.411
{ca gln 143} 2.121 25.667 8.701
{ca met 144} 2.294 21.909 8.132
{ca met 145} -.327 21.086 10.763
{ca thr 146} -2.833 23.864 10.177
{ca ala 147} -2.095 24.829 6.582
@subgroup dominant {Ca++}
@vectorlist {Ca++ 1,2} color= yellowtint
{Ca 1} P -13.638 53.352 31.5
{Ca 1} -13.638 53.352 31.5
{Ca 1} P U -14.638 53.352 31.5
{Ca 1} U -12.638 53.352 31.5
{Ca 1} P U -13.638 52.352 31.5
{Ca 1} U -13.638 54.352 31.5
{Ca 1} P U -13.638 53.352 30.5
{Ca 1} U -13.638 53.352 32.5
{Ca 2} P -17.797 50.156 20.859
{Ca 2} -17.797 50.156 20.859
{Ca 2} P U -18.797 50.156 20.859
{Ca 2} U -16.797 50.156 20.859
{Ca 2} P U -17.797 49.156 20.859
{Ca 2} U -17.797 51.156 20.859
{Ca 2} P U -17.797 50.156 19.859
{Ca 2} U -17.797 50.156 21.859
@vectorlist {Ca++ 3,4} color= yellowtint
{Ca 3} P 15.035 17.711 17.954
{Ca 3} 15.035 17.711 17.954
{Ca 3} P U 14.035 17.711 17.954
{Ca 3} U 16.035 17.711 17.954
{Ca 3} P U 15.035 16.711 17.954
{Ca 3} U 15.035 18.711 17.954
{Ca 3} P U 15.035 17.711 16.954
{Ca 3} U 15.035 17.711 18.954
{Ca 4} P 13.784 23.887 8.345
{Ca 4} 13.784 23.887 8.345
{Ca 4} P U 12.784 23.887 8.345
{Ca 4} U 14.784 23.887 8.345
{Ca 4} P U 13.784 22.887 8.345
{Ca 4} U 13.784 24.887 8.345
{Ca 4} P U 13.784 23.887 7.345
{Ca 4} U 13.784 23.887 9.345
@group {CLN view2} dominant animate moview= 2
@subgroup {ca} instance= {Calphas}
@subgroup {ca+} instance= {Ca++}
@group {2 sites} dominant animate moview= 3
@vectorlist {E h 3,4} instance= {E helix 3,4}
@vectorlist {loop 3,4} instance= {Ca loop 3,4}
@vectorlist {F h 3,4} instance= {F helix 3,4}
@vectorlist {Ca 3,4} instance= {Ca++ 3,4}
@group {Ca++ site4} animate moview= 4
@subgroup dominant {main ch}
@vectorlist {mc E} color=pink
{ca ala 128} P 7.571 21.118 5.02
{c ala 128} 8.742 22.028 5.345
{o ala 128} 8.5 23.007 6.087
{c ala 128} P 8.742 22.028 5.345
{n asn 129} 9.933 21.729 4.922
{ca asn 129} 11.14 22.484 5.227
@vectorlist {mc lp} color=sea
{ca asn 129} P 11.14 22.484 5.227
{c asn 129} 11.31 23.71 4.327
{o asn 129} 11.619 23.618 3.115
{c asn 129} P 11.31 23.71 4.327
{n ile 130} 11.083 24.868 4.91
{ca ile 130} 11.162 26.175 4.22
{c ile 130} 12.56 26.742 4.22
{o ile 130} 13.161 26.91 3.146
{c ile 130} P 12.56 26.742 4.22
{n asp 131} 13.143 26.994 5.374
{ca asp 131} 14.49 27.585 5.494
{c asp 131} 15.594 26.66 5.005
{o asp 131} 16.789 27.007 5.137
{c asp 131} P 15.594 26.66 5.005
{n gly 132} 15.246 25.509 4.492
{ca gly 132} 16.074 24.483 3.963
{c gly 132} 17.166 23.967 4.841
{o gly 132} 18.301 23.695 4.342
{c gly 132} P 17.166 23.967 4.841
{n asp 133} 16.913 23.784 6.118
{ca asp 133} 17.961 23.224 7.01
{c asp 133} 17.785 21.71 7.061
{o asp 133} 18.65 21.089 7.709
{c asp 133} P 17.785 21.71 7.061
{n gly 134} 16.78 21.133 6.419
{ca gly 134} 16.597 19.67 6.441
{c gly 134} 15.947 19.212 7.759
{o gly 134} 15.861 18.001 8.073
{c gly 134} P 15.947 19.212 7.759
{n gln 135} 15.437 20.157 8.506
{ca gln 135} 14.802 20.011 9.811
{c gln 135} 13.467 20.752 9.846
{o gln 135} 13.288 21.657 9.023
{c gln 135} P 13.467 20.752 9.846
{n val 136} 12.611 20.379 10.798
{ca val 136} 11.302 21.075 10.853
{c val 136} 11.269 21.767 12.199
{o val 136} 11.462 21.126 13.259
{c val 136} P 11.269 21.767 12.199
{n asn 137} 11.103 23.068 12.077
{ca asn 137} 11.008 23.901 13.32
@vectorlist {mc F} color=sky
{ca asn 137} P 11.008 23.901 13.32
{c asn 137} 9.526 24.179 13.558
{o asn 137} 8.658 23.803 12.742
{c asn 137} P 9.526 24.179 13.558
{n tyr 138} 9.269 24.804 14.689
{ca tyr 138} 7.918 25.107 15.152
{c tyr 138} 7.099 25.81 14.103
{o tyr 138} 5.946 25.454 13.771
{c tyr 138} P 7.099 25.81 14.103
{n glu 139} 7.721 26.83 13.545
{ca glu 139} 7.168 27.636 12.441
{c glu 139} 6.781 26.763 11.264
{o glu 139} 5.631 26.802 10.793
{c glu 139} P 6.781 26.763 11.264
{n glu 140} 7.732 25.965 10.767
{ca glu 140} 7.39 25.044 9.626
{c glu 140} 6.327 24.057 10.076
{o glu 140} 5.337 23.789 9.351
{c glu 140} P 6.327 24.057 10.076
{n phe 141} 6.443 23.555 11.293
{ca phe 141} 5.474 22.608 11.866
@subgroup dominant {Ca site}
@vectorlist {Ca-site sc} color=yellow
{ca asn 129} P 11.14 22.484 5.227
{cb asn 129} 12.269 21.482 5.181
{cg asn 129} 13.604 22.086 5.542
{nd2 asn 129} 14.65 21.555 4.923
{cg asn 129} P 13.604 22.086 5.542
{od1 asn 129} 13.666 23.014 6.366
{ca asp 131} P 14.49 27.585 5.494
{cb asp 131} 14.704 28.096 6.923
{cg asp 131} 14.959 26.954 7.889
{od1 asp 131} P 15.078 27.133 9.112
{cg asp 131} 14.959 26.954 7.889
{od2 asp 131} 15.096 25.841 7.343
{ca asp 133} P 17.961 23.224 7.01
{cb asp 133} 18.005 23.909 8.348
{cg asp 133} 16.755 23.757 9.211
{od1 asp 133} P 16.821 24.148 10.404
{cg asp 133} 16.755 23.757 9.211
{od2 asp 133} 15.73 23.258 8.69
{ca glu 140} P 7.39 25.044 9.626
{cb glu 140} 8.647 24.35 9.129
{cg glu 140} 9.78 25.306 8.658
{cd glu 140} 11.126 24.668 8.574
{oe1 glu 140} P 11.416 23.758 9.341
{cd glu 140} 11.126 24.668 8.574
{oe2 glu 140} 11.9 25.077 7.693
@vectorlist {lig bonds} color=orange
{oe1 glu 140} P U 11.876 23.783 9.147
{Ca 4} U 13.324 23.862 8.539
{Ca 4} P U 13.378 24.143 8.205
{oe2 glu 140} U 12.306 24.821 7.833
{od2 asp 131} P U 14.84 25.459 7.539
{Ca 4} U 14.04 24.269 8.149
{Ca 4} P U 13.757 23.685 7.888
{od1 asn 129} U 13.693 23.216 6.823
{od2 asp 133} P U 15.261 23.41 8.607
{Ca 4} U 14.253 23.735 8.428
{Ca 4} P U 13.68 23.419 8.487
{o gln 135} U 13.392 22.125 8.881
@vectorlist {ligand O} color=red
{od1 asn 129} P U 13.566 23.014 6.366
U 13.766 23.014 6.366
P U 13.666 22.914 6.366
U 13.666 23.114 6.366
P U 13.666 23.014 6.266
U 13.666 23.014 6.466
{od2 asp 131} P U 14.996 25.841 7.343
U 15.196 25.841 7.343
P U 15.096 25.741 7.343
U 15.096 25.941 7.343
P U 15.096 25.841 7.243
U 15.096 25.841 7.443
{od2 asp 133} P U 15.63 23.258 8.69
U 15.83 23.258 8.69
P U 15.73 23.158 8.69
U 15.73 23.358 8.69
P U 15.73 23.258 8.59
U 15.73 23.258 8.79
{o gln 135} P U 13.188 21.657 9.023
U 13.388 21.657 9.023
P U 13.288 21.557 9.023
U 13.288 21.757 9.023
P U 13.288 21.657 8.923
U 13.288 21.657 9.123
{oe1 glu 140} P U 11.316 23.758 9.341
U 11.516 23.758 9.341
P U 11.416 23.658 9.341
U 11.416 23.858 9.341
P U 11.416 23.758 9.241
U 11.416 23.758 9.441
{oe2 glu 140} P U 11.8 25.077 7.693
U 12. 25.077 7.693
P U 11.9 24.977 7.693
U 11.9 25.177 7.693
P U 11.9 25.077 7.593
U 11.9 25.077 7.793
@vectorlist {Ca++} color=yellowtint
{Ca 4} P 13.784 23.887 8.345
{Ca 4} 13.784 23.887 8.345
{Ca 4} P U 13.284 23.887 8.345
{Ca 4} U 14.284 23.887 8.345
{Ca 4} P U 13.784 23.387 8.345
{Ca 4} U 13.784 24.387 8.345
{Ca 4} P U 13.784 23.887 7.845
{Ca 4} U 13.784 23.887 8.845
@kinemage 7
@caption (B&T Fig. 2.17, 2.18)
A righthanded crossover connection (in yellow, with green turns) between parallel beta strands (red). If the connection went on the other side of the sheet (approximated by the gold "wrong" loop) it would be lefthanded, which almost never occurs.  View2 looks diagonally from an edge of the sheet and View3 from an end of the sheet.  (from PDB file 8ADH)
@zoom 1.06
@zslab 320
@center 17.687 17.09 37.95
@matrix
.992111 -.094289 -.082617 -.026183 -.800327 .59899 -.122599 -.592102 -.796482
@2zoom 1.06
@2zslab 250
@2matrix
.838322 -.124815 .530695 -.395667 -.80897 .434757 .375052 -.574445 -.727563
@3zoom 0.94
@3zslab 220
@3matrix
.968342 -.238789 .072754 .036209 .422736 .905528 -.246986 -.874227 .418
@group {betasheet} dominant 
@vectorlist {beta} color= red 
{ser 193} P 16.103 24.384 45.38
{thr 194} 17.46 20.896 44.815
{cys 195} 15.79 18.63 42.216
{ala 196} 16.15 15.003 41.12
{val 197} 15.114 13.9 37.614
{phe 198} 14.83 10.123 37.074
{gly 199} 15.45 9.386 33.324
{ala 217} P 20.47 25.47 42.743
{arg 218} 21.124 21.77 42.185
{ile 219} 19.987 19.18 39.67
{ile 220} 20.78 15.53 40.22
{gly 221} 20.09 13.613 36.925
{val 222} 19.587 9.86 37.473
{asp 223} 19.965 7.16 34.904
{thr 238} P 24.773 19.84 38.323
{glu 239} 25.414 16.175 39.13
{cys 240} 24.54 12.774 37.67
{val 241} 24.32 9.52 39.64
{phe 264} P 11.29 18.26 43.837
{ser 265} 11.765 14.946 42.126
{phe 266} 10.68 14. 38.6
{glu 267} 9.96 10.5 37.376
@group {crossovers} 
@subgroup {Righthand} dominant 
@vectorlist {ba loop} color=sea
{gly 199} P 15.45 9.386 33.324
{leu 200} 17.84 11.4 31.183
{gly 201} 16.01 10.94 27.815
@vectorlist {R crossover} color= yellow 
{gly 201} P 16.01 10.94 27.815
{gly 202} 14.53 13.96 25.9
{val 203} 11.565 14.823 28.13
{gly 204} 14.07 14.245 30.884
{leu 205} 16.497 16.844 29.46
{ser 206} 13.575 19.24 29.07
{val 207} 12.726 18.95 32.835
{ile 208} 16.346 19.86 33.635
{met 209} 16.035 22.925 31.38
{gly 210} 12.81 23.87 33.213
{cys 211} 14.423 23.45 36.685
{lys 212} 17.21 25.677 35.42
{ala 213} 14.95 28.32 33.94
{ala 214} 13.11 28.15 37.25
{gly 215} 16.4 28.71 39.04
@vectorlist {ab loop} color=greentint
{gly 215} P 16.4 28.71 39.04
{ala 216} 17.12 25.465 40.945
{ala 217} 20.47 25.47 42.743
@subgroup {Left(wrong)} dominant 
@vectorlist {lefthand} color= gold 
{phe 198} P 14.83 10.123 37.074
{LH crossover} 17. 7. 39.
{LH crossover} 19.38 5.47 45.55
{LH crossover} 19. 7. 47.
{LH crossover} 22. 12. 50.
{LH crossover} 20.35 16.36 49.58
{LH crossover} 20. 21. 46.
{LH crossover} 21.124 21.77 42.185
@kinemage 8
@caption (B&T Fig. 2.20)
Animate, to see triose phosphate isomerase (TIM) built up from four beta-alpha-beta-alpha motifs that are consecutive both in the amino acid sequence and in the 3-dimensional structure - colored yellow, red, green, and blue to approximately match Fig. 2.20.  In the starting animation frame, either the baba units or the central beta barrel and the crossover loops can be turned on and off separately.  View1 is from the end and View2 from the side of the barrel.  (from PDB file 1TIM)
@zoom 1.0
@zslab 200
@center 44.036 32.076 4.203
@matrix <end>
.908224 -0.007058 -0.418425 0.219626 0.859135 0.462224 0.356221 -0.511699 0.781838
@2zoom 1.06
@2zslab 230
@2center 44.082 28.927 0.337
@2matrix <side>
-.037683 -0.263344 -0.963965 -0.737183 0.658582 -0.151099 0.674641 0.704926 -0.21895
@group {trioseP isom} animate
@subgroup dominant {baba1} 
@vectorlist {Nt} color=yellowtint master= {crossovers}
{ca ala a 1} P 43.888 10.862 -6.231
{ca pro a 2} 46.689 12.815 -4.561
{ca arg a 4} 44.872 15.621 -2.73
{ca lys a 5} 48.356 17.146 -2.714
@vector {b1} color=gold master= {beta}
{ca lys a 5} P 48.356 17.146 -2.714
{ca phe a 6} 49.089 18.463 0.778
{ca phe a 7} 48.167 22.143 0.886
{ca val a 8} 49.431 24.957 3.063
{ca gly a 9} 47.866 28.415 2.952
{ca gly a 10} 49.931 31.243 4.444
{ca asn a 11} 47.688 34.272 4.999
{ca trp a 12} 49.605 37.344 6.156
@vectorlist {a1} color=yellowtint master= {crossovers}
{ca trp a 12} P 49.605 37.344 6.156
{ca lys a 13} 46.563 39.437 6.985
{ca met a 14} 46.973 43.163 7.714
{ca asn a 15} 50.265 42.571 9.545
{ca gly a 16} 53.921 42.484 8.409
{ca lys a 17} 56.028 45.6 7.756
{ca lys a 17} P 56.028 45.6 7.756
{ca arg a 18} 58.426 45.887 4.759
{ca lys a 19} 61.308 44.493 6.772
{ca ser a 20} 59.618 41.661 8.626
{ca leu a 21} 57.834 40.518 5.457
{ca gly a 22} 61.039 40.496 3.416
{ca glu a 23} 62.555 38.502 6.261
{ca leu a 24} 59.729 35.964 6.319
{ca ile a 25} 59.916 35.426 2.564
{ca his a 26} 63.706 35.115 2.479
{ca thr a 27} 63.456 32.534 5.255
{ca leu a 28} 60.724 30.593 3.456
{ca asp a 29} 62.901 30.56 0.336
{ca gly a 30} 66.045 29.241 2.013
{ca ala a 31} 63.772 26.781 3.766
{ca lys a 32} 64.687 23.769 1.656
{ca leu a 33} 61.809 21.731 3.019
{ca ser a 34} 59.57 21.466 -.029
{ca ala a 35} 58.146 18.064 -.864
{ca asp a 36} 54.946 17.124 -2.626
@vector {b2} color=gold master= {beta}
{ca asp a 36} P 54.946 17.124 -2.626
{ca thr a 37} 53.594 20.226 -.903
{ca glu a 38} 51.71 23.096 -2.509
{ca val a 39} 52.576 26.237 -.469
{ca val a 40} 50.597 29.382 -1.289
{ca cys a 41} 51.395 32.788 0.264
{ca gly a 42} 48.969 35.728 0.364
{ca ala a 43} 49.602 39.339 1.474
@vectorlist {a2} color=yellowtint master= {crossovers}
{ca ala a 43} P 49.602 39.339 1.474
{ca pro a 44} 47.937 42.78 1.473
{ca ser a 45} 47.192 44.008 -2.047
{ca ser a 45} P 47.192 44.008 -2.047
{ca ile a 46} 50.236 46.293 -2.171
{ca tyr a 47} 52.807 44.21 -.361
{ca leu a 48} 51.442 41.793 -2.983
{ca asp a 49} 53.851 42.866 -5.727
{ca phe a 50} 56.806 42.821 -3.353
{ca ala a 51} 55.725 39.329 -2.264
{ca arg a 52} 55.607 38.115 -5.876
{ca gln a 53} 58.93 39.671 -6.774
{ca lys a 54} 60.842 38.663 -3.658
{ca leu a 55} 59.28 35.167 -3.452
{ca asp a 56} 59.883 32.109 -5.639
{ca ala a 57} 57.552 30.037 -7.819
{ca lys a 58} 57.439 27.159 -5.339
{ca ile a 59} 55.393 29.385 -3.031
@subgroup dominant {baba2} 
@vector {b3} color=pink master= {beta}
{ca ile a 59} P 55.393 29.385 -3.031
{ca gly a 60} 52.304 30.474 -4.958
{ca val a 61} 50.971 33.965 -4.137
{ca ala a 62} 47.245 34.205 -3.462
{ca ala a 63} 45.631 37.415 -2.203
{ca gln a 64} 43.062 37.684 0.562
{ca asn a 65} 39.864 39.207 -.798
@vector {a3} color=pinktint master= {crossovers}
{ca asn a 65} P 39.864 39.207 -.798
{ca cys a 66} 39.147 39.353 -4.528
{ca tyr a 67} 36.585 41.442 -6.413
{ca lys a 68} 34.097 40.347 -9.084
{ca lys a 68} P 34.097 40.347 -9.084
{ca val a 69} 34.07 42.502 -12.282
{ca pro a 70} 36.963 43.479 -14.586
{ca lys a 71} 37.097 47.222 -13.922
{ca gly a 72} 34.912 49.844 -12.302
{ca ala a 73} 33.86 52.555 -9.927
{ca phe a 74} 34.532 51.193 -6.433
{ca thr a 75} 36.978 53.362 -4.537
{ca gly a 76} 38.901 50.958 -2.235
{ca glu a 77} 38.22 47.45 -3.712
{ca ile a 78} 40.288 45.875 -6.551
{ca ser a 79} 39.869 43.472 -9.437
{ca pro a 80} 41.742 40.197 -9.802
{ca ala a 81} 42.991 41.266 -13.186
{ca met a 82} 45.313 43.471 -11.094
{ca ile a 83} 47.071 40.849 -8.991
{ca lys a 84} 47.056 38.874 -12.202
{ca asp a 85} 49.006 41.403 -14.348
{ca ile a 86} 51.376 41.909 -11.408
{ca gly a 87} 52.175 38.279 -10.521
{ca ala a 88} 49.594 36.65 -8.214
{ca ala a 89} 47.935 33.364 -9.316
@vector {b4} color=pink master= {beta}
{ca ala a 89} P 47.935 33.364 -9.316
{ca trp a 90} 45.493 32.667 -6.444
{ca val a 91} 42.804 34.451 -4.366
{ca ile a 92} 41.17 33.555 -1.021
{ca leu a 93} 37.582 34.698 -.398
{ca gly a 94} 34.655 33.997 1.909
@vector {a4} color=pinktint master= {crossovers}
{ca gly a 94} P 34.655 33.997 1.909
{ca his a 95} 36.867 34.38 5.062
{ca ser a 96} 34.833 34.248 8.29
{ca glu a 97} 36.494 37.677 8.918
{ca arg a 98} 35.185 39.168 5.603
{ca arg a 99} 31.902 37.413 6.448
{ca his a 100} 31.544 38.967 9.879
{ca val a 101} 33.143 42.449 9.553
{ca phe a 102} 32.231 43.679 6.012
{ca gly a 103} 28.968 41.78 5.554
{ca glu a 104} 30.079 40.172 2.258
{ca ser a 105} 27.46 37.602 1.222
{ca ser a 105} P 27.46 37.602 1.222
{ca asp a 106} 27.22 34.018 -.029
{ca glu a 107} 26.074 35.667 -3.192
{ca leu a 108} 29.213 37.8 -3.185
{ca ile a 109} 31.484 34.819 -2.512
{ca gly a 110} 29.787 33.121 -5.442
{ca gln a 111} 30.135 35.977 -7.941
{ca lys a 112} 33.748 36.415 -6.777
{ca val a 113} 34.637 32.75 -7.278
{ca ala a 114} 33.028 32.735 -10.724
{ca his a 115} 34.838 35.844 -12.026
{ca ala a 116} 38.17 34.598 -10.69
{ca leu a 117} 37.786 31.228 -12.411
{ca ala a 118} 36.479 32.766 -15.671
{ca glu a 119} 39.605 34.898 -15.511
{ca gly a 120} 42.05 32.086 -14.806
{ca leu a 121} 42.519 32.653 -11.103
@subgroup dominant {baba3} 
@vector {b5} color=sea master= {beta}
{ca leu a 121} P 42.519 32.653 -11.103
{ca gly a 122} 43.02 29.933 -8.55
{ca val a 123} 40.298 30.03 -5.972
{ca ile a 124} 40.297 29.438 -2.277
{ca ala a 125} 36.737 29.264 -.867
{ca cys a 126} 36.506 29.861 2.899
{ca ile a 127} 33.344 28.193 4.452
{ca gly a 128} 32.728 28.543 8.242
{ca glu a 129} 30.651 27.838 11.386
{ca lys a 130} 30.626 29.905 14.649
{ca leu a 131} 30.259 28.505 18.181
@vector {a5} color=greentint master= {crossovers}
{ca leu a 131} P 30.259 28.505 18.181
{ca asp a 132} 26.735 29.849 18.617
{ca glu a 133} 25.485 28.071 15.511
{ca arg a 134} 27.509 24.857 15.813
{ca glu a 135} 25.665 24.743 19.105
{ca ala a 136} 22.027 25.111 18.082
{ca gly a 137} 23.624 22.513 15.789
{ca ile a 138} 23.639 24.296 12.406
{ca ile a 138} P 23.639 24.296 12.406
{ca thr a 139} 27.184 23.229 11.384
{ca glu a 140} 25.371 21.259 8.702
{ca lys a 141} 23.237 24.14 7.445
{ca val a 142} 26.028 26.719 7.599
{ca val a 143} 28.755 24.771 5.807
{ca phe a 144} 26.443 22.881 3.485
{ca gln a 145} 24.762 26.08 2.314
{ca glu a 146} 27.982 28.036 1.709
{ca thr a 147} 29.526 25.134 -.189
{ca lys a 148} 26.311 25.143 -2.187
{ca ala a 149} 26.779 28.822 -3.005
{ca ile a 150} 30.409 28.223 -3.965
{ca ala a 151} 29.828 25.215 -6.204
{ca asp a 152} 26.72 26.836 -7.682
{ca asn a 153} 28.524 29.996 -8.734
{ca val a 154} 31.407 27.693 -9.656
{ca lys a 155} 32.43 26.327 -13.114
{ca asp a 156} 34.943 23.538 -12.48
{ca trp a 157} 37.581 22.884 -9.847
{ca ser a 158} 40.888 21.899 -11.483
{ca lys a 159} 41.87 25.119 -9.69
@vector {b6} color=sea master= {beta}
{ca lys a 159} P 41.87 25.119 -9.69
{ca val a 160} 39.753 25.023 -6.525
{ca val a 161} 40.18 24.451 -2.796
{ca leu a 162} 37.681 24.27 .092
{ca ala a 163} 38.958 25.528 3.507
{ca tyr a 164} 36.792 24.641 6.543
{ca glu a 165} 36.723 27.113 9.457
{ca pro a 166} 35.323 26.325 12.904
{ca val a 167} 35.006 29.641 14.746
{ca trp a 168} 33.615 27.829 17.773
@vector {a6} color=greentint master= {crossovers}
{ca trp a 168} P 33.615 27.829 17.773
{ca ala a 169} 37.307 27.509 18.572
{ca ile a 170} 38.912 30.653 17.12
{ca gly a 171} 40.02 33.04 19.864
{ca thr a 172} 36.714 31.976 21.374
{ca gly a 173} 38.208 29.761 24.078
{ca lys a 174} 37.855 25.962 23.569
{ca thr a 175} 39.838 23.016 22.099
{ca ala a 176} 39.522 21.925 18.426
{ca thr a 177} 40.648 18.278 17.99
{ca thr a 177} P 40.648 18.278 17.99
{ca pro a 178} 41.842 15.967 15.194
{ca gln a 179} 38.349 14.658 15.693
{ca gln a 180} 35.994 17.6 15.208
{ca ala a 181} 38.104 18.214 12.09
{ca gln a 182} 37.859 14.702 10.694
{ca glu a 183} 34.122 14.819 11.495
{ca val a 184} 33.251 18.118 9.782
{ca his a 185} 35.725 17.492 6.949
{ca glu a 186} 34.333 14.021 6.192
{ca lys a 187} 30.841 15.487 6.08
{ca leu a 188} 31.661 18.414 3.774
{ca arg a 189} 33.436 15.96 1.482
{ca gly a 190} 30.362 13.734 1.312
{ca trp a 191} 28.069 16.78 .714
{ca leu a 192} 30.478 17.774 -2.009
{ca lys a 193} 30.628 14.373 -3.638
{ca thr a 194} 26.846 13.818 -3.6
{ca his a 195} 25.995 17.235 -5.031
{ca val a 196} 28.807 17.477 -7.606
{ca ser a 197} 30.181 14.021 -8.506
{ca asp a 198} 32.959 11.614 -7.511
{ca ala a 199} 35.676 13.049 -9.829
{ca val a 200} 35.063 16.546 -8.365
{ca ala a 201} 34.632 15.32 -4.795
{ca val a 202} 37.807 13.506 -5.23
{ca gln a 203} 40.22 15.819 -6.914
@subgroup dominant {baba4} 
@vector {b7} color=sky master= {beta}
{ca gln a 203} P 40.22 15.819 -6.914
{ca ser a 204} 38.944 18.883 -4.863
{ca arg a 205} 41.034 19.515 -1.752
{ca ile a 206} 39.817 20.201 1.773
{ca ile a 207} 41.97 22.053 4.321
{ca tyr a 208} 41.689 22.87 8.056
{ca gly a 209} 41.144 26.54 8.844
{ca gly a 210} 42.16 26.883 12.527
{ca ser a 211} 45.082 27.324 14.951
@vector {a7} color=bluetint master= {crossovers}
{ca ser a 211} P 45.082 27.324 14.951
{ca val a 212} 47.694 25.292 13.13
{ca thr a 213} 51.024 25.119 14.963
{ca thr a 213} P 51.024 25.119 14.963
{ca gly a 214} 54.17 23.138 15.44
{ca gly a 215} 52.866 19.769 16.638
{ca asn a 216} 49.228 20.42 15.674
{ca cys a 217} 50.005 20.309 11.924
{ca lys a 218} 51.458 16.82 12.319
{ca glu a 219} 48.663 15.899 14.708
{ca leu a 220} 45.918 16.896 12.269
{ca ala a 221} 47.287 15.743 8.943
{ca ser a 222} 48.069 12.489 10.695
{ca gln a 223} 44.246 12.535 10.072
{ca his a 224} 42.57 10.879 7.062
{ca asp a 225} 40.204 13.048 4.932
{ca val a 226} 42.382 16.104 5.619
{ca asp a 227} 44.491 17.512 2.751
@vector {b8} color=sky master= {beta}
{ca asp a 227} P 44.491 17.512 2.751
{ca gly a 228} 45.804 20.839 4.135
{ca phe a 229} 45.537 23.956 6.268
{ca leu a 230} 45.226 27.703 6.648
{ca val a 231} 47.704 29.363 8.994
{ca gly a 232} 47.519 32.975 10.276
@vector {a8} color=bluetint master= {crossovers}
{ca gly a 232} P 47.519 32.975 10.276
{ca gly a 233} 49.096 33.936 13.697
{ca ala a 234} 51.529 31.113 13.665
{ca ser a 235} 52.37 31.508 9.958
{ca leu a 236} 54.352 34.65 10.913
{ca lys a 237} 57.42 32.687 11.924
{ca lys a 237} P 57.42 32.687 11.924
{ca pro a 238} 59.587 29.766 10.79
{ca glu a 239} 56.465 28.069 12.099
{ca phe a 240} 55.255 27.942 8.486
{ca val a 241} 58.082 25.646 7.385
{ca asp a 242} 57.833 23.783 10.671
{ca ile a 243} 54.039 23.269 10.051
{ca ile a 244} 54.2 22.758 6.271
{ca asn a 245} 56.56 19.837 6.945
{ca ala a 246} 53.541 17.946 8.371
{ca lys a 247} 53.24 14.342 7.088
{ca his a 248} 52.071 10.79 8.078
@group dominant {null} animate
@vector {dummy}
@group dominant {beta1} animate
@vector {N t} instance= {Nt}
@vector {b 1} instance= {b1}
@group dominant {alpha1} animate
@vector {N t} instance= {Nt}
@vector {b 1} instance= {b1}
@vector {a 1} instance= {a1}
@group dominant {beta2} animate
@vector {N t} instance= {Nt}
@vector {b 1} instance= {b1}
@vector {a 1} instance= {a1}
@vector {b 2} instance= {b2}
@group dominant {alpha2} animate
@subgroup {ba ba 1} instance= {baba1}
@group dominant {beta3} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {newpart}
@vector {b 3} instance= {b3}
@group dominant {alpha3} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {newpart}
@vector {b 3} instance= {b3}
@vector {a 3} instance= {a3}
@group dominant {beta4} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {newpart}
@vector {b 3} instance= {b3}
@vector {a 3} instance= {a3}
@vector {b 4} instance= {b4}
@group dominant {alpha4} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@group dominant {beta5} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@subgroup {newpart}
@vector {b 5} instance= {b5} master= {beta}
@group dominant {alpha5} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@subgroup {newpart}
@vector {b 5} instance= {b5}
@vector {a 5} instance= {a5}
@group dominant {beta6} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@subgroup {newpart}
@vector {b 5} instance= {b5}
@vector {a 5} instance= {a5}
@vector {b 6} instance= {b6}
@group dominant {alpha6} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@subgroup {ba ba 3} instance= {baba3}
@group dominant {beta7} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@subgroup {ba ba 3} instance= {baba3}
@subgroup {newpart}
@vector {b 7} instance= {b7}
@group dominant {alpha7} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@subgroup {ba ba 3} instance= {baba3}
@subgroup {newpart}
@vector {b 7} instance= {b7}
@vector {a 7} instance= {a7}
@group dominant {beta8} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@subgroup {ba ba 3} instance= {baba3}
@subgroup {newpart}
@vector {b 7} instance= {b7}
@vector {a 7} instance= {a7}
@vector {b 8} instance= {b8}
@group dominant {alpha8} animate
@subgroup {ba ba 1} instance= {baba1}
@subgroup {ba ba 2} instance= {baba2}
@subgroup {ba ba 3} instance= {baba3}
@subgroup {ba ba 4} instance= {baba4}