Bioinformatic Analysis

AGTC offers a variety of bioinformatic services and works closely with clients to ensure that the analysis procedures are appropriate to the specific question(s) being addressed.

Examples of services currently offered include the following*:

  • Genome/Transcriptome Assembly
    Newbler
  • Mapping reads to reference assemblies
    Bowtie
    TopHat
  • Differential gene expression studies:
    Cufflinks
    HTSeq and DESeq
  • Bisulphite sequence analysis:
    Bismark
  • Setting up BLAST databases
  • Client training in bioinformatic analysis procedures

* AGTC’s bioinformatic service offerings are driven by client demand.  If you do not see a specific service listed, please contact AGTC staff to see if we can help.

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