Plant Physiology I
List of some of the terms and facts you should know:
Section: Introduction:
Lecture I: Introduction to Plant Development:
alternation of generations sporophytic gametophytic
meiosis mitosis haploid
diploid microspore megaspore
dominant recessive
dual fertilization SAM RAM
anticlinal periclinal
preprophase band totipotent plasmodesmata
Lecture II: Introduction to Tissues and Cell Types:
primary growth secondary growth meristem
protoderm procambium ground meristem
vascular cambium cork cambium xylem
phloem initials and derviatives
differentiation morphogenesis ground tissue
vascular tissue dermal tissue simple tissue
complex tissue parenchyma collenchyma
sclerenchyma epidermis chlorenchyma
aerenchyma fibers sclerids
lignin tracheary elements (tracheids and vessel elements)
perforation plate pits sieve cells
sieve tube member primary and secondary cell wall
P-protein companion cell periderm
Lecture III: Cell Division, Expansion, and Communication:
formative cell division proliferative division mitogen
cyclin-dependent kinase cyclin-dependent kinase inhibitor
cellulose terminal rosette microfibrils isotropic growth
polymer creep hemicellulose xyloglucan endo-transglycosylase (XET)
expansin endo-glycosylase (EGase) pectin middle lamella
methyl esterified pectin pectin methyl esterase (PME)
polygalacturonase (PG) extensin acid growth
primary, unbranched plasmodesmata secondary, branched plasmodesmata
Symplastic domains cell ablation size exclusion limits (SEL)
cytoplasmic sleeve microchannels movement proteins
Central cavity Extracellular sphincter desmotubule
Apoplast: E. Münch suggested that the xylem elements and the interconnecting cell walls of the plant be considered as a continuum. He named this space within the plant the apoplast.
Symplast: Conversely, the continuum defined by the living cytoplasm of an assemblage of cells that are interconnected by plasmodesmata is called the symplast. The symplast does or does not include the vacuole depending on the author.
Section II: Embryo and Seed Development:
Lecture IV and V: Embryogenesis:
Lecture VI: Endosperm Development:
Lecture VII: Apomixix and Somatic Embryogenesis:
Lecture VIII: Seed and Fruit Development:
maturation desiccation anhydrobiosis orthodox seeds
Recalcitrant seeds monocotyledones dicotyledones
scutellum endosperm co-translationally
Testa endospermic seeds aleurone layer
Storage protein oligomers signal peptide
protein body unit membrane Golgi apparatus
protein storage vacuoles proplastids free fatty acid
triglycerides oleosomes amylose
(lipid bodies)
amylopectin amyloplast phytin
globoid anhydrobiosis
Parthenocarpic carpel pseudocarpic fruit pericarp
Phytosterols hydroxy-methyl CoA reductase (HMGR)
An antiquated protein classification system but that is still in use today to describe storage proteins according to their solubility.
Albumins: Proteins that freely dissolve in water.
Globulins: Proteins that dissolve in buffers of high ionic strength but not water.
Prolamins: Proteins that dissolve in aqueous alcohol (70-90% v/v).
Glutelins: Proteins that dissolve in dilute buffers of either high or low pH.
DO NOT get the signal peptide of proteins destined for an intra- or inter-cellular compartment other than the chloroplast confused with a transit peptide that is used to place proteins in the chloroplast.
Three free fatty acids that serve as the structural basis for most (all?) seed storage lipids.
Palmitate (16:0)
Stearate (18:0)
Oleate (18:1)
Four major forms of polysaccharide deposited as a seed storage reserve include starch, fructan, galactomannan, and xyloglucan.
Phytin is a water-insoluble accumulation of a mixed salt of magnesium, calcium, and potassium ionically bound to myo-inositol hexaphosphoric acid (phytic acid).
There are usually three periods or phases of fruit growth; 1) fruit set; 2) cell division and, 3) cell elongation.
There is a general observation that the number of fertilized ovules within a fruit controls the initial rate of cell division in the ovary.
Lecture IX and X: Dormancy and Germination:
quiescent dormant Hypogeal Epigeal Imbibition
lag phase expansion of the embryo phaseic acid
Seed water uptake can be divided into three stages
Imbibition phase
lag phase
radicle elongation phase
S = Svedberg Unit, the rate of sedimentation of a macromolecule in a centrifugal field. Named for the Swedish physical chemist that invented the ultracentrifuge.
Escape time is the duration necessary for Pfr to effect dormancy alleviation after which photoreversion to the Pr from is inconsequential since seed dormancy has already been alleviated.
Section III: Vegetative Development:
Lectures XI and XII: Trichome, Stomatal, and Vascular Tissue Development:
Subsidiary cells Stomatal initials guard mother cell stomatal initials
primary meristemoid cells secondary (satellite) meristemoid cells
stomatal twinning abaxial adaxial sympodial bundles
provascular tissue vascular cambium protophloem metaphloem
midvein veinlets areole freely ending veinlets
intramarginal vein striate venation pattern commissural veins
anastomose ontogeny acropetal intercalary growth basipetal
Canalization of signal flow:
OR...
Diffusion-reaction prepattern:
Protoxylem Xylem sieve pores symplastic
Protophloem Phloem syncytium apoplastic
Metaxylem Zinnia elegans phloem mother cell aphid stylets
Metaphloem assimilate companion cell Sieve element
polymer-trapping hypothesis sieve element reticulum, SER
P-protein sieve tube exudate proteins, STEPS xylogenisis
tracheary element, TE transdifferentiation cambial tissue Apoptosis
Stage I: de-differentiation Stage II: Restriction of developmental potential
Tracheary element differentiation-related genes, TEDs necrosis
Stage III: TE specific development programmed cell death
Lecture XIII: Root Development:
Formative cell division Proliferative cell division promeristem
quiescent center stele pericycle endodermis cortex
epidermis lateral root cap columellar root cap cell ablation
trichoblasts
The histogen concept:
The positional concept:
Three major forms of trichblast formation:
The pattern of epidermal cell differentiation (trichoblast or atrichoblast) appears random.
Epidermal cell fate appears to be linked to asymmetric cell division with the larger daughter cell remaining an atrichoblast and the smaller developing into a trichoblast. This group includes many monocots.
Epidermal cells positioned in the crevice between underlying cortex cells (situated over an anticlinal division of underlying cortical cells) while atrichoblasts form from epidermal cells positioned on top of cortical cells (situated outside a periclonal division of underlying cortical cells).
Lecture XIV: SAM and Initiation of Organs:
Lecture XV: Juvenile and Adult Vegetative Development:
Section IV: Reproductive development:
Lecture XVI and XVII: Transition to Reproductive Development:
vegetative meristem inflorescence meristem flower meristems
anlagen phyllotaxy determinacy primordia imperfect flowers
perfect flowers dioecious monoecious
Plastochron: The duration of the time from the initiation of one leaf to the initiation of the next. Leaf here can be substituted with flower or any other organ arising peripherally from a meristem in a regular fashion.
Three hypothesis to explain how plants switch from vegetative to reproductive growth.
Florigen/antiflorigen hypothesis: The plant produces either a yet to be discovered stimulatory or repressive compound in response to conditions favorable or unfavorable to flowering, respectively.
Nutrient diversion hypothesis: A favorable flowering environment is any environment that increases the amount of photoassimilate available to the shoot apical meristem, converting it to an inflorescence meristem.
Multifactorial control hypothesis: Combinations of assimilate and known phytohormones act synergistically to induce flowering whenever environmental cues alter assimilate and hormonal ratios such that they are favorable for the transition to flowering.
Lecture XVIII and XIX: Flower Development:
Lecture XX and XXI: Gamete Development:
Lecture XXII: Pollen and Pollination, fertilization:
Sporophytic cells tapetal initial sporogenous initial (Pollen mother cell)
pollen tetrad genetically effective cells (GECs) anthers
filament androecium microsporangia stamens sepal
gynoecium microspores generative cells vegetative cell intine
exine sporopollenin bicellular tricellular endothecium
stomium circular cell cluster (CCC) theca pistal
Lecture XXIII: Self Incompatability:
gametophytic SI system sporophytic SI system S-haplotype
S-locus glycoprotein S-locus receptor kinase Class I responses
Class II responses tryphine cleistogamy
Sporophytic self-incompatibility: This system is dependent on the ability of the pistal to differentiate between pollen produced by the same plant or genetically related plant and pollen from a plant, of the same species, that is not genetically related. Typically this inhibition is rapid resulting in the inability of the genetically related pollen to complete germination on the stigma. The phenotype of the pollen is determined sporophytically by the diploid genome of the parent plant.
Gametophytic self-incompatibility: In this system fertilization does not occur any time the S-allele of the gamete matches an active S-allele of the plant to be fertilized. Typically, the pollen complete germination on the stigma but at some point as the pollen tube traverses the transmitting tissue, its progress is terminated and the pollen tube dies, probably through uptake of RNases present on the stigma and in the style.