A guide for using NIH Image J for single slice cross-sectional area and composition analysis of the thigh from computed tomography.

TitleA guide for using NIH Image J for single slice cross-sectional area and composition analysis of the thigh from computed tomography.
Publication TypeJournal Article
Year of Publication2019
AuthorsLong D, Tezanos AGVillasan, Wise JN, Kern PA, Bamman MM, Peterson CA, Dennis RA
JournalPLoS One
Volume14
Issue2
Paginatione0211629
Date Published2019
ISSN1932-6203
KeywordsAged, Aged, 80 and over, Female, Humans, Male, Middle Aged, Muscle, Skeletal, Software, Thigh, Tomography, X-Ray Computed
Abstract

Reports using computed tomography (CT) to estimate thigh skeletal muscle cross-sectional area and mean muscle attenuation are often difficult to evaluate due to inconsistent methods of quantification and/or poorly described analysis methods. This CT tutorial provides step-by-step instructions in using free, NIH Image J software to quantify both muscle size and composition in the mid-thigh, which was validated against a robust commercially available software, SliceOmatic. CT scans of the mid-thigh were analyzed from 101 healthy individuals aged 65 and older. Mean cross-sectional area and mean attenuation values are presented across seven defined Hounsfield unit (HU) ranges along with the percent contribution of each region to the total mid-thigh area. Inter-software correlation coefficients ranged from R2 = 0.92-0.99 for all specific area comparisons measured using the Image J method compared to SliceOmatic. We recommend reporting individual HU ranges for all areas measured. Although HU range 0-100 includes the majority of skeletal muscle area, HU range -29 to 150 appears to be the most inclusive for quantifying total thigh muscle. Reporting all HU ranges is necessary to determine the relative contribution of each, as they may be differentially affected by age, obesity, disease, and exercise. This standardized operating procedure will facilitate consistency among investigators reporting computed tomography characteristics of the thigh on single slice images. Trial Registration: ClinicalTrials.gov NCT02308228.

DOI10.1371/journal.pone.0211629
Alternate JournalPLoS ONE
PubMed ID30730923
PubMed Central IDPMC6366874
Grant ListI01 RX001203 / RX / RRD VA / United States
UL1 TR001998 / TR / NCATS NIH HHS / United States